| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1441 |
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| Symbol | cobD |
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| ID | 3773613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1495174 |
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| End bp | 1496151 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799873 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_400458 |
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| Protein GI | 81300250 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.282346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.506208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCTG CGTCACTGAC GACGATCGCG GTCTTGGGGT TGGCGGCCTT GCTGGATTAC
GGTGTCGGCG ATCCCTGGGG TTGGCCGCAT CCGGTGCAGG CTTTGGGCTG GGTCATTGCT
TGCTGGCGCG ACTGGACGTT TCGCTGGCTG AAATCTGCGA TCGCTCAGCG GATCTCAGGC
ATGGTCCTGA CGATTGTTCT GGTGGCTGGT AGCGCGATCG CTAGCTGGGT TGCTTTTGGG
GCGATCGCTC GTCTCTCACC ACTCCTCTCG GCAGGTCTGC AAGTGATTCT GCTGGCAAGC
TGTTTCGCCG GTCGCAGCTT GCGGGAAGCA GCTGCGGAAG TTCTGAAACC CCTAGCTGCT
GAGGATTTGC CAGCAGCTCG AAGGGCACTG AGTCGCTACG TGGGCCGCGA TACTGATCAG
CTGTCGGCGC TCGAAATTCA GCGAGCGGTG CTGGAAACGG TGACTGAAAA TTCGACGGAT
GGTGTTTTGG CACCACTGTT CTATGCCGGA TTAGGAGTAT TGCTGGGACT TGGCCCTGTT
CCGTTGGCGA TCGCCTATAA GGCTGCCAGC ACCTTGGATT CGATGGTGGG CTACCGCCGC
CCGCCCTACA CGAACCTAGG TTGGTTTCCA GCTCGTAGCG AGGATGTCTG GACTTGGTTG
CCCTGCCGCT TGGTGGTGCT GACGATCGCG CTATTCAGTG GTCAGCCCCG ACAGGTCTGG
CAAATTTGCT GCCGCGATGC TCCGGCGGAT CCCAGTCCCA ATGCAGGCTG GAGCGAAGCG
GCCTACGCAG CTGCGCTGGG GGTTCAAGTC GGCGGCGACA ACGTCTACCA AGGTCAAATC
GTCTCGAAGC CGCTACTGGG GGATCCACAG CGATCGCTGG ATGCCACAGT CATTCAGCAA
GCCTTGCAGT TAACCCGCAT CGCTTTTTTG CTTTGGTTAG CTGTGATCGC GGGACTGCTA
CTAGCGTTGG GGCATTAG
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| Protein sequence | MMSASLTTIA VLGLAALLDY GVGDPWGWPH PVQALGWVIA CWRDWTFRWL KSAIAQRISG
MVLTIVLVAG SAIASWVAFG AIARLSPLLS AGLQVILLAS CFAGRSLREA AAEVLKPLAA
EDLPAARRAL SRYVGRDTDQ LSALEIQRAV LETVTENSTD GVLAPLFYAG LGVLLGLGPV
PLAIAYKAAS TLDSMVGYRR PPYTNLGWFP ARSEDVWTWL PCRLVVLTIA LFSGQPRQVW
QICCRDAPAD PSPNAGWSEA AYAAALGVQV GGDNVYQGQI VSKPLLGDPQ RSLDATVIQQ
ALQLTRIAFL LWLAVIAGLL LALGH
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