Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1439 |
Symbol | |
ID | 3773611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1492429 |
End bp | 1494030 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799871 |
Product | NAD(P)H-quinone oxidoreductase subunit 4 |
Protein accession | YP_400456 |
Protein GI | 81300248 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.13982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGCG AACAATTTCC CTGGCTTACA GGCATTATCC TGCTGCCGAT CTTGGCAGCG CTTCCCATCC CACTGATCCC TGACAAGGAC GGTCGGACAG TCCGCTGGTA CTCCTTATTT GTGGGGCTGG CGGACTTTGC GTTGATGGTC TACGCCTTCT GGCAGCATTT CGATCGCAGT GAAGCAGGGC TTCAGATGGT CGAAAAGATT AGCTGGGTGC CGCAAATCGG GCTCAACTGG TCCTTAGCTG TCGATGGTCT ATCGATGCCC TTGGTTCTGC TGACTGGCTT GGTCACCACC CTGGCAATCC TGGCCTCGTG GAACATCAAC GTTAAACCCA AGTTGTTCCA CTTCCTATTG CTGCTGCTCT ACGGCGCTCA GATTGCCGTG TTCACAGCTC AAGACATGAT GCTCTTCTTC CTTGTCTGGG AACTGGAGCT GGTTCCGGTC TACCTGCTGA TCTCGATTTG GGGTGGCCCC AAACGGCAGT ACGCGGCAAC CAAATTCATC CTTTACACTG CCTTAGCCTC CTTATTCATC TTGGTGGCTG GTCTGGCTTT AGCCTTCAGT GGCGACAGCT TTAGCTTTGA CCTGACTGAA CTTGGCCTTA AGGATTACAG CCTCTGGTTG GAATTACTGG CCTACGCTGG TTTCTTGATC GCCTTTGGCG TCAAGCTGTC GATCTTCCCG CTCCATACGT GGTTGCCGGA TGCCCACGGC GAAGCCAATG CACCCGGTTC GATGCTGCTG GCCGGCATTC TCTTGAAGAT GGGCGGCTAC GCGCTGATTC GCTTTAACGT GCAGCTTCTG CCAGAGGCGC ATATCCGTTT TGCACCTGTT CTTGCCGTGC TTGGCATTGT CAACATCATC TACGGCGCGC TTAATGCCTT TGCCCAGGAC AACCTGAAGC GCAAGATCGC CTACTCCTCG ATCTCGCACA TGGGCTTTGT CCTTTTGGGA ATTGCCGCTT ACAACAGCTT GGGATTGAAT GGCGCTCTGC TGCAGATGCT CTCCCATGGT CTGATTGCAG CGGCACTCTT CTTCTTGGCC GGTGTTGCCT ACGAGCGCAC CCACACGCTG CAGATTCCCC AAATCAGTGG GCTTGCCAAG CAAATGCCGA TTACCTTCGC TCTCTTTACC GTCACCGCCA TGGCATCCTT AGCGCTGCCC GGCATGAGTG GCTTTGTCAG CGAACTAACG GTGTTCTTGG GCTTTACCGA TAGCGTTTAC AGCAGTGGTT TCCGAACCGT CACGATTCTG CTGGCGGCTG TTGGTCTCGT CTTGACGCCG ATGTATCTGC TCTCGATGCT GCGGCGGATC TTTTACGGCA CCTACAACAT CCAACTGGGG CAAGTTCTGG CTGATGCCAA ACCTCGAGAG CTATTCGTTG CCTTCTGCCT CTTGGTTCCG ACCCTAGCGA TCGGTTTCTA TCCGAAGCTG ACGACGCAGG TGTACGACGT GACCACGACG GCTCTGGCGG CTCAGGTACA GTCCAACTTG CCGGTCGTGG CGCTGGCCCA GCAGGGAAGT CTCTACTCCC AGATGCCGGC TGCTGAAGAA GCCACTGCGG TCTCGATGAC TGCTCCGCCT GTGATCGACT GA
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Protein sequence | MTSEQFPWLT GIILLPILAA LPIPLIPDKD GRTVRWYSLF VGLADFALMV YAFWQHFDRS EAGLQMVEKI SWVPQIGLNW SLAVDGLSMP LVLLTGLVTT LAILASWNIN VKPKLFHFLL LLLYGAQIAV FTAQDMMLFF LVWELELVPV YLLISIWGGP KRQYAATKFI LYTALASLFI LVAGLALAFS GDSFSFDLTE LGLKDYSLWL ELLAYAGFLI AFGVKLSIFP LHTWLPDAHG EANAPGSMLL AGILLKMGGY ALIRFNVQLL PEAHIRFAPV LAVLGIVNII YGALNAFAQD NLKRKIAYSS ISHMGFVLLG IAAYNSLGLN GALLQMLSHG LIAAALFFLA GVAYERTHTL QIPQISGLAK QMPITFALFT VTAMASLALP GMSGFVSELT VFLGFTDSVY SSGFRTVTIL LAAVGLVLTP MYLLSMLRRI FYGTYNIQLG QVLADAKPRE LFVAFCLLVP TLAIGFYPKL TTQVYDVTTT ALAAQVQSNL PVVALAQQGS LYSQMPAAEE ATAVSMTAPP VID
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