| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1425 |
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| Symbol | |
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| ID | 3773597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1478240 |
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| End bp | 1479070 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637799857 |
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| Product | carbon dioxide concentrating mechanism protein CcmO |
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| Protein accession | YP_400442 |
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| Protein GI | 81300234 |
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| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.125275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCTT CTCTTCCCGC CTATTCTCAG CCTCGCAATG CAGGTGCACT AGGGGTCATT
TGTACCCGTA GTTTTCCAGC GGTTGTCGGC ACTGCAGACA TGATGCTCAA GTCGGCCGAT
GTCACATTGA TCGGCTATGA GAAAACAGGC TCGGGCTTTT GTACAGCAAT CATCCGGGGT
GGCTATGCCG ACATCAAGCT GGCTCTTGAG GCTGGCGTAG CGACAGCTCG TCAGTTTGAG
CAGTACGTTT CCAGCACTAT TCTGCCGCGG CCTCAAGGCA ACCTCGAAGC CGTGTTGCCG
ATTAGCCGGC GGCTCTCCCA AGAAGCCATG GCCACGCGAT CGCATCAGAA TGTTGGCGCG
ATTGGGCTAA TTGAGACCAA TGGGTTCCCT GCTTTGGTTG GAGCAGCCGA TGCCATGCTC
AAATCGGCTA ACGTCAAGCT GATTTGTTAT GAGAAAACGG GCAGCGGTCT CTGTACTGCG
ATCGTGCAAG GCACGGTTTC TAATGTGACC GTTGCGGTCG AAGCCGGGAT GTATGCCGCT
GAGCGGATCG GCCAGCTCAA CGCAATCATG GTCATTCCCA GACCGCTAGA CGACTTGATG
GACAGCTTGC CTGAGCCGCA GTCGGATAGC GAAGCAGCCC AGCCACTCCA ATTACCGCTG
CGGGTTCGCG AAAAACAACC GCTGTTGGAG CTACCGGAAC TCGAACGGCA GCCGATCGCG
ATCGAAGCAC CGCGACTTTT AGCAGAAGAG CGACAGTCTG CGTTGGAATT GGCTCAAGAG
ACACCGCTCG CCGAGCCCTT AGAGCTCCCC AATCCTCGTG ATGATCAGTG A
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| Protein sequence | MSASLPAYSQ PRNAGALGVI CTRSFPAVVG TADMMLKSAD VTLIGYEKTG SGFCTAIIRG
GYADIKLALE AGVATARQFE QYVSSTILPR PQGNLEAVLP ISRRLSQEAM ATRSHQNVGA
IGLIETNGFP ALVGAADAML KSANVKLICY EKTGSGLCTA IVQGTVSNVT VAVEAGMYAA
ERIGQLNAIM VIPRPLDDLM DSLPEPQSDS EAAQPLQLPL RVREKQPLLE LPELERQPIA
IEAPRLLAEE RQSALELAQE TPLAEPLELP NPRDDQ
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