Gene Synpcc7942_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1424 
Symbol 
ID3773596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1477713 
End bp1478198 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID637799856 
Productcarbon dioxide concentrating mechanism protein 
Protein accessionYP_400441 
Protein GI81300233 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0922842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTAC CGCCCCTAGA GCCCCCGATC AGCGATCGCT ACTTTGCCAG TGGTGAGGTC 
ACGATTGCTG CTGATGTGGT GATTGCTCCG GGGGTGTTGC TGATTGCGGA GGCCGACAGC
CGGATTGAGA TCGCAAGTGG CGTCTGTATT GGCCTTGGAT CGGTGATCCA CGCTCGCGGC
GGTGCAATCA TCATTCAAGC AGGAGCCTTG CTTGCTGCCG GAGTGCTGAT TGTTGGCCAG
AGTATTGTCG GTCGTCAGGC TTGCCTGGGT GCATCCACCA CTCTGGTTAA CACCTCGATC
GAGGCTGGCG GTGTCACGGC GCCTGGCAGC TTGTTGAGTG CTGAAACGCC CCCAACAACC
GCGACGGTCA GCTCTTCCGA GCCCGCCGGG CGATCGCCTC AATCCAGTGC AATCGCCCAC
CCCACTAAGG TCTACGGCAA GGAACAGTTT TTGCGGATGC GCCAGAGCAT GTTCCCCGAT
CGCTAA
 
Protein sequence
MHLPPLEPPI SDRYFASGEV TIAADVVIAP GVLLIAEADS RIEIASGVCI GLGSVIHARG 
GAIIIQAGAL LAAGVLIVGQ SIVGRQACLG ASTTLVNTSI EAGGVTAPGS LLSAETPPTT
ATVSSSEPAG RSPQSSAIAH PTKVYGKEQF LRMRQSMFPD R