| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1416 |
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| Symbol | |
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| ID | 3774129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1468344 |
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| End bp | 1470995 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799848 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_400433 |
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| Protein GI | 81300225 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC TCGTCATCGT CGAGTCGCCC ACCAAGGCGC GCACCATCCG CAACTACCTG
CCGAAGGATT ACCGCGTCGA AGCATCGATG GGACATGTCC GCGATCTTCC ACAGTCGGCA
AGCGACATTC CCACCGAACT GAAAGGTGAG AAATGGAGCA ATCTTGGGGT CGATGTTGAA
AATAACTTCG CGCCGCTTTA TATCGTCCCC AAGGATAAAA AAAAGATTGT CAAAACATTG
AAAGATGCAC TGAAAGATGC CGATGAACTG ATCCTGGCAA CGGACGAAGA CCGCGAAGGC
GAAAGTATTA GCTGGCACTT GTTGCAGCTT TTGCAACCTC GGGTGCCCAC GAAGCGCATG
GTCTTTCACG AAATCACCCA AGAGGCGATT CAAGCAGCCC TGAAAAATTG TCGGGATGTC
GATCAGCGCT TGGTCCATGC CCAAGAAACC CGCCGGATTC TCGATCGCTT GGTGGGCTAC
ACCCTGTCCC CCCTGCTCTG GAAAAAAATT GCCTGGGGCC TATCCGCCGG GCGGGTGCAG
TCGGTGGCAG TACGCCTACT CGTCCAGCGG GAACGGGCGC GGCGGGCCTT CCGCCAAGGC
AGCTACTGGG ATCTCAAAGC TCAGCTGACG GTGGAGGCTG GCCAGTTTGA AGCCAAACTC
TGGACATTGG CAGGCCAACG GCTAGCCACA GGCAATGACT TTGACGAAAG CACCGGCCAA
ATCATTGCCG GCCGTCAGGT CTGTCTGCTC GATCAGCAAG AAGCGGAAGC CCTGCGCGAT
CGCCTCCAGA CCCAGCCCTG GCAAGTAAAG TCGCTGGAAG AAAAACCCAC CACTCGCAAA
CCAGCCCCAC CCTTCACCAC TTCGACCTTG CAGCAGGAGT CGAACCGGAA GCTACGGCTC
TCAGCCCGGG AAACGATGCG AGTCGCCCAG AGCCTCTACG AGCGAGGCTT TATCACCTAC
ATGCGGACGG ATTCGGTCCA TCTGTCGCAA CAGGCGATCG AGGCAGCTCG CAGCTGCGTT
GAGCAGATGT ATGGCAAAAA CTATCTCAGC CCCCAGCCTC GCCAGTTCAC CACCAAGAGC
AAAAACGCCC AGGAAGCCCA CGAAGCAATT CGGCCAGCGG GGAACACGTT TAGGCTGCCC
CAAGAAACGG GACTGTCGGG CGCCGAGTTT GCGCTCTACG ACCTGATCTG GAAGCGCACG
ATCGCCTCTC AGATGGCTGA GGCCCGACAA ACCATGCTGA GTGTGTTGTT GGAGGTTGAT
AATGCTGAGT TCCGCGCCAG TGGCAAGCGG ATCGATTTCC CGGGCTTCTT CCGCGCTTAC
GTTGAAGGCT CAGACGATCC TGATGCAGCC CTAGAAGATC GCGAAATTCT GCTGCCGGCG
TTGAAGGTGG GCGATCGCCC CACCTGTCAG GAACTGGCCG CGATCGGTCA TGAAACCCAG
CCGCCAGCCC GCTACACCGA AGCCTCACTG GTCAAAATGC TGGAGAACGA GGGCATTGGT
CGTCCCAGTA CCTACGCCAG CATCATCGGC ACGATCGTCG ATCGCGGCTA TGCCCAATTG
GTGAGCAACA CTCTAACGCC GACCTTCACG GCTTTTGCAG TGACAGCATT GCTGGAGCAA
CATTTCCCCG ATTTGGTGGA CACCAGCTTC AGTGCGCGGA TGGAGCAGTC CCTCGACGAC
ATTTCCAATG GTGAAGTCGA CTGGCTACCC TATCTCAGTC AGTTTTATCG GGGCGATCGT
GGCTTGGAAG AACAGGTCAA ACTTCGCGAA AGTGAAATTG ATCCGGCTGC CGCTCGCACA
GTCGCGCTGG AGGGACTGCC CGCCAAAGTC CGTATTGGTC GTTTTGGCGC TTACCTCGAG
GCCGAGGCCG ATGGAGAACC GATCAAAGCA AACCTGCCCA AGGAGCTAAC GCCTGCTGAT
TTGGATGTCC AGCGAGTGGA AACACTACTG CGGCAAAAAA CCGAAGGGCC GGACCAACTG
GGAACACATC CTGAAACCGA CGAGCCGATT TACCTGCTTA CGGGTGCCTA CGGTCCCTAC
GTCCAACTTG GGGCAGCCAC CGAGGAAAAA CCCAAGCCGA AGCGGGCTTC TTTGCCCAAG
GGTATGAGCT TAGAAACGAT CTCGTTGGAG CAAGCCGTAG GGCTGTTGTC GCTACCACGT
ACCTTGGGCG AGCATCCCGA AACAGGACGA CGGATCCAAG CAGGTCTAGG GCGATTTGGA
CCCTACGTGG TCTGCGATCT GGGGGGTGGT GAGAAGGATT ACCGATCGCT CAAAGCCGAT
GATGATGTGC TGACCATCGA TCTCGATCGT GCCCTCGAAC TCCTGGCACA ACCCAAGAAG
AGTCGGGGTC GCGGCAAGGA ACCGATTCGG GAGGTTGGCC TCCATCCTGA TGACCAAGCC
CCCATTCAAA TTTTTGAGGG TCCCTACGGT CTTTACCTCA AACATGGCAA GGTCAATGCC
TCGCTGCCCG AGGATGAGAA GCCGGAGACG ATCAGCCTGG AAACAGCAGT TGCAGCCTTA
GCGGCCAAAG CCGGTCAGGC CAAGGCTAAA GGAGGCCGCC GTAGTACGGG AACACCAAAG
TCCGGTGAAA CGAAAGCCCG AACAACCAAA ACGACTAAGA AAACCACGAC TCGTCGGACT
ACGAGCCGCT AA
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| Protein sequence | MPKLVIVESP TKARTIRNYL PKDYRVEASM GHVRDLPQSA SDIPTELKGE KWSNLGVDVE
NNFAPLYIVP KDKKKIVKTL KDALKDADEL ILATDEDREG ESISWHLLQL LQPRVPTKRM
VFHEITQEAI QAALKNCRDV DQRLVHAQET RRILDRLVGY TLSPLLWKKI AWGLSAGRVQ
SVAVRLLVQR ERARRAFRQG SYWDLKAQLT VEAGQFEAKL WTLAGQRLAT GNDFDESTGQ
IIAGRQVCLL DQQEAEALRD RLQTQPWQVK SLEEKPTTRK PAPPFTTSTL QQESNRKLRL
SARETMRVAQ SLYERGFITY MRTDSVHLSQ QAIEAARSCV EQMYGKNYLS PQPRQFTTKS
KNAQEAHEAI RPAGNTFRLP QETGLSGAEF ALYDLIWKRT IASQMAEARQ TMLSVLLEVD
NAEFRASGKR IDFPGFFRAY VEGSDDPDAA LEDREILLPA LKVGDRPTCQ ELAAIGHETQ
PPARYTEASL VKMLENEGIG RPSTYASIIG TIVDRGYAQL VSNTLTPTFT AFAVTALLEQ
HFPDLVDTSF SARMEQSLDD ISNGEVDWLP YLSQFYRGDR GLEEQVKLRE SEIDPAAART
VALEGLPAKV RIGRFGAYLE AEADGEPIKA NLPKELTPAD LDVQRVETLL RQKTEGPDQL
GTHPETDEPI YLLTGAYGPY VQLGAATEEK PKPKRASLPK GMSLETISLE QAVGLLSLPR
TLGEHPETGR RIQAGLGRFG PYVVCDLGGG EKDYRSLKAD DDVLTIDLDR ALELLAQPKK
SRGRGKEPIR EVGLHPDDQA PIQIFEGPYG LYLKHGKVNA SLPEDEKPET ISLETAVAAL
AAKAGQAKAK GGRRSTGTPK SGETKARTTK TTKKTTTRRT TSR
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