Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1414 |
Symbol | |
ID | 3774127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1465709 |
End bp | 1466434 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799846 |
Product | ATPase |
Protein accession | YP_400431 |
Protein GI | 81300223 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAT CCGCGCCTCC CGTCATTCAG TTCGAGCATG TCAGCAAGAT CTACGGCGAA GGGGAAACTA CGGTCCGTGC CTTGGATCAT GTCGACTTTC AAGTTCGGGC GGGTGAGTAT TGCGCGATTA TGGGCGCTTC GGGTTCGGGA AAGTCGACGG CAATGAACCT GATTGGTTGC CTTGATCGCC CCACAGCTGG CCGCTATTAC CTCGACGGCA CCGATGTCGC CGATTTGGAT GACGACGCCC TCGCTGCCGT GCGCAATCGC AAGATTGGAT TTGTTTTTCA GCAATTTCAC CTGTTGCCCC AGCTCAGCGC GGTCGAGAAT GTGATGCTGC CGATGATCTA CGCCGGCATT TCTCAGCAGG AGCGGCGCGA TCGCGCTGTC GCTGCTTTAA CCCAAGTGGG CCTCGCTCAA CGACTGGACA ATAAACCCAA TCAGCTGTCT GGGGGACAAC AACAACGGGT GGCGATCGCC CGAGCGATCG TGAATCAACC AGTGCTATTG CTGGCAGATG AACCGACTGG AGCATTGGAT TCCCAGACGA CCGAAGAAGT GCTGAATATC TTCGACCAGT TGCACCAGCG GGGCATCACG ATCGTGATCG TCACCCACGA AGCCGAGGTC GCCGATCGTG CCGAGCGGGT GATCTGGTTC CGCGATGGCC AAATCCAGCG GGAAACCCAA AATCCGCCTC GGCCAGTCCT TGCAGCTACC TTTTGA
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Protein sequence | MAESAPPVIQ FEHVSKIYGE GETTVRALDH VDFQVRAGEY CAIMGASGSG KSTAMNLIGC LDRPTAGRYY LDGTDVADLD DDALAAVRNR KIGFVFQQFH LLPQLSAVEN VMLPMIYAGI SQQERRDRAV AALTQVGLAQ RLDNKPNQLS GGQQQRVAIA RAIVNQPVLL LADEPTGALD SQTTEEVLNI FDQLHQRGIT IVIVTHEAEV ADRAERVIWF RDGQIQRETQ NPPRPVLAAT F
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