Gene Synpcc7942_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1406 
Symbol 
ID3774119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1456803 
End bp1457909 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content58% 
IMG OID637799838 
ProductATPase 
Protein accessionYP_400423 
Protein GI81300215 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAT CCGAGGTTCT TTGCCTAGAC CGTGTCTGTA AGCAGTTCTC AGGAAGTTCT 
CTGGCAGCGG TTGATCAAGT CAGCTTTGAA TTAGAAGCTG GAGAAATTCT GGGACTGGTT
GGTCCCTCAG GTTGCGGCAA GACGACCTTA TTGCGAATGA TTGCTGGTTT TGAGAGCCTG
CAGTCTGGCA GCATCCAGCT CGCAGGAGAA ACCGTAGCCA CCGCCCAGCG ATCGCTCCCG
CCCGAAACTC GGTCAGTGGG CATGGTCTTT CAGGACTATG CACTGTTTCC GCATCTAACG
GTTTTGGACA ATGTCTGCTT TGGGCTGCGC GATCGCAAGG GGTCTGCCGC TGTCGCTCGA
CAAGCGCTGG CTTTGGTAGG CCTCGAAGGA CTAGAACGCC GCTATCCCCA TGAACTCTCT
GGCGGCCAAC AACAACGAGT AGCTCTTGCT CGGGCTTTGG CACCGCAGCC CCCGCTGATC
TTGCTGGATG AGCCGCTCAG TAATCTTGAT GTTCAAGTCC GGCTGCGATT GCGGCAGGAA
CTGCGTGACA TCCTGCGCCA AGCTCAGGCA ACGGCAATTC TAGTCACCCA CGACCAAGAA
GAAGCTCTTT CCATTTGCGA TCGCGTGGCG GTAATGCGTT TGGGCCGTTT TGAGCAGATT
GGTCAGCCCG AGGAGCTATT TCAACACCCG GCCAGCCGCT TTGTCGCTGA GTTTTTATCC
CAAGCCAACT TCTTGGCCAC AGAGTATCAA GGTGATGCGT GGCGCACGGT GCTGGGCGAC
TTTGAAGCAC CGGGGGGATT GGAGGGCAGC CGTACGGGTG GCGAGCCGCC AGTGGTGATG
GTGCGGCAAG AGGATGTTTT GCTACATCCC CATCCTGAGG GCACCGGCCT GGTCCGCGAT
CGCCAGTTTC TGGGTCGCGA TTACCGCTAT TTTGTCCAGC TTCCCGCCGG ACTGGAAATC
CAAGTCCTTG GGCCAGTCAG CGAGGCGATC GCCGTGGGGA CGGCCGTGCA GGTTCAATTG
CGGACAGGGC AAGCCCGCCT CTATCCCTAC GACCTGCCCT TGGTTTTACG GGGCACTTCC
ACGCGTAATG CTGCCGCCCG AGCTTGA
 
Protein sequence
MSQSEVLCLD RVCKQFSGSS LAAVDQVSFE LEAGEILGLV GPSGCGKTTL LRMIAGFESL 
QSGSIQLAGE TVATAQRSLP PETRSVGMVF QDYALFPHLT VLDNVCFGLR DRKGSAAVAR
QALALVGLEG LERRYPHELS GGQQQRVALA RALAPQPPLI LLDEPLSNLD VQVRLRLRQE
LRDILRQAQA TAILVTHDQE EALSICDRVA VMRLGRFEQI GQPEELFQHP ASRFVAEFLS
QANFLATEYQ GDAWRTVLGD FEAPGGLEGS RTGGEPPVVM VRQEDVLLHP HPEGTGLVRD
RQFLGRDYRY FVQLPAGLEI QVLGPVSEAI AVGTAVQVQL RTGQARLYPY DLPLVLRGTS
TRNAAARA