Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1406 |
Symbol | |
ID | 3774119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1456803 |
End bp | 1457909 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799838 |
Product | ATPase |
Protein accession | YP_400423 |
Protein GI | 81300215 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCAAT CCGAGGTTCT TTGCCTAGAC CGTGTCTGTA AGCAGTTCTC AGGAAGTTCT CTGGCAGCGG TTGATCAAGT CAGCTTTGAA TTAGAAGCTG GAGAAATTCT GGGACTGGTT GGTCCCTCAG GTTGCGGCAA GACGACCTTA TTGCGAATGA TTGCTGGTTT TGAGAGCCTG CAGTCTGGCA GCATCCAGCT CGCAGGAGAA ACCGTAGCCA CCGCCCAGCG ATCGCTCCCG CCCGAAACTC GGTCAGTGGG CATGGTCTTT CAGGACTATG CACTGTTTCC GCATCTAACG GTTTTGGACA ATGTCTGCTT TGGGCTGCGC GATCGCAAGG GGTCTGCCGC TGTCGCTCGA CAAGCGCTGG CTTTGGTAGG CCTCGAAGGA CTAGAACGCC GCTATCCCCA TGAACTCTCT GGCGGCCAAC AACAACGAGT AGCTCTTGCT CGGGCTTTGG CACCGCAGCC CCCGCTGATC TTGCTGGATG AGCCGCTCAG TAATCTTGAT GTTCAAGTCC GGCTGCGATT GCGGCAGGAA CTGCGTGACA TCCTGCGCCA AGCTCAGGCA ACGGCAATTC TAGTCACCCA CGACCAAGAA GAAGCTCTTT CCATTTGCGA TCGCGTGGCG GTAATGCGTT TGGGCCGTTT TGAGCAGATT GGTCAGCCCG AGGAGCTATT TCAACACCCG GCCAGCCGCT TTGTCGCTGA GTTTTTATCC CAAGCCAACT TCTTGGCCAC AGAGTATCAA GGTGATGCGT GGCGCACGGT GCTGGGCGAC TTTGAAGCAC CGGGGGGATT GGAGGGCAGC CGTACGGGTG GCGAGCCGCC AGTGGTGATG GTGCGGCAAG AGGATGTTTT GCTACATCCC CATCCTGAGG GCACCGGCCT GGTCCGCGAT CGCCAGTTTC TGGGTCGCGA TTACCGCTAT TTTGTCCAGC TTCCCGCCGG ACTGGAAATC CAAGTCCTTG GGCCAGTCAG CGAGGCGATC GCCGTGGGGA CGGCCGTGCA GGTTCAATTG CGGACAGGGC AAGCCCGCCT CTATCCCTAC GACCTGCCCT TGGTTTTACG GGGCACTTCC ACGCGTAATG CTGCCGCCCG AGCTTGA
|
Protein sequence | MSQSEVLCLD RVCKQFSGSS LAAVDQVSFE LEAGEILGLV GPSGCGKTTL LRMIAGFESL QSGSIQLAGE TVATAQRSLP PETRSVGMVF QDYALFPHLT VLDNVCFGLR DRKGSAAVAR QALALVGLEG LERRYPHELS GGQQQRVALA RALAPQPPLI LLDEPLSNLD VQVRLRLRQE LRDILRQAQA TAILVTHDQE EALSICDRVA VMRLGRFEQI GQPEELFQHP ASRFVAEFLS QANFLATEYQ GDAWRTVLGD FEAPGGLEGS RTGGEPPVVM VRQEDVLLHP HPEGTGLVRD RQFLGRDYRY FVQLPAGLEI QVLGPVSEAI AVGTAVQVQL RTGQARLYPY DLPLVLRGTS TRNAAARA
|
| |