Gene Synpcc7942_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1405 
Symbol 
ID3774118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1456260 
End bp1456787 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID637799837 
Producthypothetical protein 
Protein accessionYP_400422 
Protein GI81300214 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.542001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTGT TCTTGGAGCA GCGCTGGTTG CAACGGCTAG CGATCGCAGT CATCCCCCTC 
TCGATTTTGG GCCTGAGCTG CCGAGGCCAA GCGGAGAGCG ATCGCGCCCA GTATTTACCG
ATCGGCGCTG AGGTCAAGAT TGGCGGCCAG CGTTTGGAAC TGGAAGTGGC AGCAACCCCT
GCTCAGCAGG CGCGTGGGCT GATGTTTCGA CCACGTCTTG CCGACAACCG CGGCATGATT
TTTCCGTTCT CCCAAGCCCG TCCCGTCAGC TTCTGGATGT TCAACACACC GGAGCCGCTG
GACATGATCT TTCTCTACCA AGGGGAAGTG CGAGCGATTG TGCGTGAGGT GCCGCCCTGT
CTGGCCATGC CCTGTCCCAG CTATGGTCCG GCCTTGGTAC CGATTGATGC GGTCATTGAA
CTGCGGGCTG GACGGAGTCA GGAGCTTGGC TTGAATAGGG GCGATCGCCT CAATGTGCAA
TTTCTGCAGC CTGTCGGCCA AACAGTGCCC ACCTCTCAGG AACCATAA
 
Protein sequence
MLVFLEQRWL QRLAIAVIPL SILGLSCRGQ AESDRAQYLP IGAEVKIGGQ RLELEVAATP 
AQQARGLMFR PRLADNRGMI FPFSQARPVS FWMFNTPEPL DMIFLYQGEV RAIVREVPPC
LAMPCPSYGP ALVPIDAVIE LRAGRSQELG LNRGDRLNVQ FLQPVGQTVP TSQEP