Gene Synpcc7942_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1402 
Symbol 
ID3774115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1453317 
End bp1454576 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content47% 
IMG OID637799834 
Producthypothetical protein 
Protein accessionYP_400419 
Protein GI81300211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0903793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCAC GCTTGAAACG ATGGTTTGGA TCGGCATTTC GCAGGTCGAG AACGATTAAC 
AATGAGCCCC TGAACAAAGT TAGTCTTGTT GTCATTATTG TTATTGATAT TTTCATCCTC
GTTAATGTCT TTTCAGGACT CTCAGAAATT GGTCGTTGGC CACTCATGGC TAGCGAGTCT
TATCCTTGCT ATCAAGACTG GCAAATTTAT CAAGACCCAC AACTTCGCAA GGCAGAGAAT
CAGGCTTTTA AGCTAGTCTC TCAAGCTGTA AGAATCGGGA TGGAAACCCC TAGTTCCTTT
CTTTCGCTGA CTAGTCAATA TCAACAGTCG CAGCGCGATC GCCTCGGCTC AGCCTCTCCA
CTCTGTCTAC AATATGCAGA GCGCTATGAC CAAATCACTA AGGCAAATTA TTCTAATATT
CTTGTCTCGA TTAATCAAAA ACAAGCCACG ATCAACCAGC TAGAAGCTGA AAATCAAAAA
ATTCGTGAGC AGTACGACTC TTCCCTGCTG GAGCAAATCG CAGGGCAGTC TCGAGATCAG
GCAATCACCG ATGTTGGGGC AGATCAAGCT CGCCAAAAAC TTGAGGCTAA TCAAGCAACG
ATTCAGACCA ATCGGCAGGC GATCGCTGGT TTAGAACAAA CGCTGATCAC TCAGCCTGCA
AGTCGCTCCT TTTTGGCGCT GCTGGCCGAT CGTAGTCAAT TTGAACAGGT TGCACAGGGC
TATCAGCGAT CGCTGTTTTG GTATCCAGCC CTGCAACTCT TGCTACAGAT TATATTCCTT
GCTCCACTCC TAGCGATCGC GACAGTTATC CATCGCTATG CTGAACGACG TGACTATGGA
TTGCTGGCTT TGTTGAGCTG GCACTTACTA GTTATCTTCT CTCTGCCATT ACTGTTTAAA
GCCTTTGAGC TACTGCGAAT CAACATTATT TTTAATGCTC TCTCACAGCT AGTTCAAGCT
CTATTTGGCC AGCTCCTCTT CCTCGTCAGT TATCTCTATA TCTTCCTGAT TCCTGCCTTG
GGTTTTGGCA TCATCAAACT CGCCCAAGCT TGGATTTTTA ACCCACGCAT TCAAGCCGCT
AATCGAGTCC AGAAGTCCCG CTGTATCAAG TGCGCCAAAC GGCTCCCTGC TCAAGAAGCG
CACTGCCCCC ACTGTGGCCA TTATCAATAC ATCGAGTGCC ATCATTGCCA CCACCTGACC
TATCAATATC TGCCCTACTG TCGGGCGTGT GGCGAGAATT TGCGATCGCC GCAGTCGTGA
 
Protein sequence
MWSRLKRWFG SAFRRSRTIN NEPLNKVSLV VIIVIDIFIL VNVFSGLSEI GRWPLMASES 
YPCYQDWQIY QDPQLRKAEN QAFKLVSQAV RIGMETPSSF LSLTSQYQQS QRDRLGSASP
LCLQYAERYD QITKANYSNI LVSINQKQAT INQLEAENQK IREQYDSSLL EQIAGQSRDQ
AITDVGADQA RQKLEANQAT IQTNRQAIAG LEQTLITQPA SRSFLALLAD RSQFEQVAQG
YQRSLFWYPA LQLLLQIIFL APLLAIATVI HRYAERRDYG LLALLSWHLL VIFSLPLLFK
AFELLRINII FNALSQLVQA LFGQLLFLVS YLYIFLIPAL GFGIIKLAQA WIFNPRIQAA
NRVQKSRCIK CAKRLPAQEA HCPHCGHYQY IECHHCHHLT YQYLPYCRAC GENLRSPQS