Gene Synpcc7942_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1401 
Symbol 
ID3774114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1452727 
End bp1453104 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content53% 
IMG OID637799833 
Producthypothetical protein 
Protein accessionYP_400418 
Protein GI81300210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0197456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA AACGCCTCGG CCACGTTGCC ATTTGCGTGA AAGATATTGA AGCTGCCGCT 
GCGTTCTATC AGGGCTTGGG TCTCGAGCTA GTTTGGCAGG ATGCAGACTG GGCATACCTT
AAGGCGGGTG AGGACGGCCT GGCGCTACTC GGCCCCAGCT ACAAGCAAGC AGGTCCACAC
TTTGGCTTTA TTTTTCACGA TCGCGCCGAA GTTGACACGG CTTATGAGCA GCTGAAAACC
CAGGGTGTTG AACTAACGCG CATCCATGAG CACCGTGATG GTACGGCCTC CTTCTACGGC
AAAGACCTTG ACGGCAACTG GTTTGAATAC CTCTATGAAC CCATCAAGGC AACCGTAGAA
ACTACAGTTT CGGCTTGA
 
Protein sequence
MDLKRLGHVA ICVKDIEAAA AFYQGLGLEL VWQDADWAYL KAGEDGLALL GPSYKQAGPH 
FGFIFHDRAE VDTAYEQLKT QGVELTRIHE HRDGTASFYG KDLDGNWFEY LYEPIKATVE
TTVSA