| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1394 |
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| Symbol | |
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| ID | 3774107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1443546 |
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| End bp | 1445309 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637799826 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_400411 |
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| Protein GI | 81300203 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.54966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG CGCCCGCTGC TGCCGATTCC TTGGCGATCG CTGCTTCAGG CCTCACCTAC
CGTGTGGCGC TACCAAATCC CAGCAATCAC TTATTTGAGG TAACGCTGCA AATCTCGGAT
TGGCAATCTG AGATAGTGAC GGTGCAGATG CCAGCTTGGA CGCCGGGTTC CTATCTCCTG
CGAGAATACG CCCGTCATCT CCAGAACTTT CGGGCACAAA CTGCAACAGG ACAACCACTA
CTGTGGCGCA AACTCCGCAA AAATGCTTGG CAGATTGAGA CGCAAGAACA CTCTGAGATT
TACATCAGCT ATCAGGTTCT CGCCACAGAG CTGACTGTTC GGACGAACCA TCTCGATCGC
AGTCATGGTT TCTTCACGCC AGCAGCGCTC TGCCTCTACA TCGACGCTTG GCGCGATCGC
CCCTGTCAAG TCGAAATCAA GGCACCGGAA GGCTGGAACG TCGCCACAGC CCTACCCGCA
ATCGCTCACA ACTGTTTCCG AGCGGCCGAC TTCGACACTT TGGTGGATAG CCCCTTTGAA
ATTGGGCCAG AAGGAACCCA GGAATTTACG GTTCTTGGCA AGAAACACTA CTGGCGGACT
TGGGGCGGCA ACCTCGACAG CGATCGCCTC TTGGCGGATA CCGCACGCCT CATTGAAACT
GAAGCAGCCA TCTTCGGCGG ACTGCCCTAC GACCACTATT GGTTCATCCT CCATCTCAGC
AGTGGTGGCT ACGGCGGCCT AGAGCACCGC GACAGCACGG TTCTGGCGTT TGATCGCCAA
GCAATCACAG AACCCGAGGG CTATCGTCGC TTCCTGCAAT TAGTTGCTCA CGAGTTTTTC
CATCTCTGGA ATGTCAAACG GATACGGCCC AAGGCGCTGG AACAGTTTGA CTACGAAGCC
GAAAACTACA CGCCCTCGCT CTGGTTTAGT GAAGGGGCAA CCAGCTACTA CGATCTGCTG
CTGCCGCTGC GGGCCGGTCT CTATGGGGTG GATAGCTTTC TGGAAGCGCT GGGTAAGGAT
CTGAGCCGCT ATCTGACGAC GCCTGGCCGC AAGGTGCAAC CGTTGGCTGA GTCGAGCTTT
GATGCTTGGG TGAAACTCTA CCGCCGCGAT GCCTACAGCG ATAACCAGCA AATGTCCTAC
TACTTGAAAG GGCAACTGGT CTGCTGGCTC CTCGATCTCG AGATTCGTAA CCACCAGCCC
GATCGCAGTT TTGATGATGT GTTGCGTCTG CTCTGGCAGC GCCACGGGCA AGGGCCAGAA
ATTGGGTTCG AGGAAGCGGA ACTACGGCAA ATTTTTAGTG AAGTCGCTGG GGTTGATCTG
ACTGACTTCT TCGAGCGCTA TGTGGATGGC CTGGAAGAAT TACCAATCGC AGCGGCAGTG
GATTCGCTAG GGCTGCAGCT TTTACCCCAG GGCTGCGATC GCCCCAGTCA TGGGCTGCGC
TTAGCTGATG AGCAGGGCCG CTGCCAAATC AAATTTGTGG CGAGTGATAG TCCGGCTGAG
CAAGCAGGCT TGATGATCGG CGATGAAATT GTTGCGCTCA ACGGTTTGCG GGTCAGTGCC
GATAACTTCT CGCGGCGGCT GGCAACTTAC CAAGCCGGTC AGGTGTTAGA GCTGACGATT
TTCCACGACG ATCAACTCCA ATCGTTTTCA CTGACCTTAG CGGAACCGCA ACCGCAAAGC
TACAACCTGC GACCGGCTGC AACAGTCACG TCCGAACAAC GCGATCGCTT CCAGCGCTGG
TTGGGTCTGG AGCCTCAGCT GTGA
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| Protein sequence | MTLAPAAADS LAIAASGLTY RVALPNPSNH LFEVTLQISD WQSEIVTVQM PAWTPGSYLL
REYARHLQNF RAQTATGQPL LWRKLRKNAW QIETQEHSEI YISYQVLATE LTVRTNHLDR
SHGFFTPAAL CLYIDAWRDR PCQVEIKAPE GWNVATALPA IAHNCFRAAD FDTLVDSPFE
IGPEGTQEFT VLGKKHYWRT WGGNLDSDRL LADTARLIET EAAIFGGLPY DHYWFILHLS
SGGYGGLEHR DSTVLAFDRQ AITEPEGYRR FLQLVAHEFF HLWNVKRIRP KALEQFDYEA
ENYTPSLWFS EGATSYYDLL LPLRAGLYGV DSFLEALGKD LSRYLTTPGR KVQPLAESSF
DAWVKLYRRD AYSDNQQMSY YLKGQLVCWL LDLEIRNHQP DRSFDDVLRL LWQRHGQGPE
IGFEEAELRQ IFSEVAGVDL TDFFERYVDG LEELPIAAAV DSLGLQLLPQ GCDRPSHGLR
LADEQGRCQI KFVASDSPAE QAGLMIGDEI VALNGLRVSA DNFSRRLATY QAGQVLELTI
FHDDQLQSFS LTLAEPQPQS YNLRPAATVT SEQRDRFQRW LGLEPQL
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