Gene Synpcc7942_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1391 
Symbol 
ID3774104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1436154 
End bp1437692 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content56% 
IMG OID637799823 
ProductMg chelatase-related protein 
Protein accessionYP_400408 
Protein GI81300200 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000825184 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCTC GGACTTGGAG TGCTGCCCTC GTCGGTTTAG ATGCAGTTCC GGTCTGCGTC 
GAAGCAGATG TTTCCGCGGG TCTTCCAGCG ATGGTCTTGG TCGGCTTACC CGATGCAGCC
ATTCAGGAAT CGAAGGAGCG GGTGCGGGCT GCGATTCGTA ATGCCGGGCT CTCGTTTCCA
ATGCAGCGGG TTGTGGTGAA TCTAGCTCCG GGTGATCTGC GCAAGGAAGG CCCAAGTTTT
GATCTGGCGA TCGCGATGGC GGTTCTGGCC GCCTCGAAGC AGTTACCGAG CCCTCAACTC
GATCGCTTTC TTCTGCTCGG AGAAGTCGCT CTTGATGGCA GCCTCCGGGC GATCGCAGGA
GTACTATCCG TCGCTGTTGC AGCCCAAAAG CTGGGTTATC AAGCCCTGGT TTTACCGGCG
GCCAATGCAG CGGAAGCCAG TCTTGTTCAA GGACTAGCGG TCTACGGTTT TGAGACGGTT
GCGGAGGTCG CTGAGTTTTT GCATCAGCCC GATCGCCATA GTCCTTACCC AGTCACCCAG
TTGGAATCGG CAGAAGTCAG CCCGTCATCG TTGCAATCAA CATTAGATTT AGCCGATGTT
CAGGGCCAGC TACAGGCGCG ACGGGCTTTA GAAATTTCTG CAGCGGGCGG TCACAATCTC
TTATTCATTG GTCCACCGGG CAGTGGCAAA ACGATGCTGG CACGGCGTCT ACCGGGCATA
TTGCCCACGC TCAGTTTTGA AGAAGCACTG GAGGTGACGC GCATTCACTC AGCAGCGGGT
CTGCTGAAAG AACGCGGACA TTTGATCTGC GATCGCCCCT TTCGCAGTCC TCATCATTCG
GCTTCTGGGC CGTCTTTGGT GGGTGGCGGA TCCTTCCCGC GGCCGGGCGA AATTTCTCTG
GCACATCGTG GCGTGTTGTT TCTGGATGAG CTGACGGAGT TCAAACGAGA AGTCTTAGAT
TTCCTACGGC AGCCTCTCGA AGACGGTCAG GTCATGATTT CGCGGACAAG ACAGTCAGTG
GCTTTTCCAG CGAGATTTAC CCTTGTTGCC AGTGCCAACC CCTGTCCCTG TGGCTATTAC
GGCGATACTC TGCAGCCCTG TACTTGCGGC CTGAATCAGC GCCAGCGCTA TTGGAGCCGC
CTGTCGGGAC CATTGCTAGA TCGAATTGAC TTGCAAGTGA GTGTGCAGCG GTTGCCACCA
ACCGATTTGG CTCGCAGTCA GCTAGGCGAG TCAACTGCGA TCGTGCGGGA TCGAGTAGCG
CAAGCTCGTC AGCGGGCTCA ACAGCGCTTT CAAGGCAGAT TGCGGTGCAA CGCCGAAATG
CAAAGTGCTG ACCTGCGCCA TTGGTGTGCC TTGACGGAGC CGACAACAGC GTTGCTCGAG
AAAATCATCA CTAAATTGCG GTTGTCTGGA CGTTCCACCG CTCGTATCCT CAAAGTTGCG
CGGACAATCG CAGATCTGGA TGGCAGTGAA CAGCTCCAGA GTCAGCATCT CGCAGAAGCA
GCTCAGTATA GAGGTCTCGA TCGCCTCGTT GAGCGCTAA
 
Protein sequence
MHARTWSAAL VGLDAVPVCV EADVSAGLPA MVLVGLPDAA IQESKERVRA AIRNAGLSFP 
MQRVVVNLAP GDLRKEGPSF DLAIAMAVLA ASKQLPSPQL DRFLLLGEVA LDGSLRAIAG
VLSVAVAAQK LGYQALVLPA ANAAEASLVQ GLAVYGFETV AEVAEFLHQP DRHSPYPVTQ
LESAEVSPSS LQSTLDLADV QGQLQARRAL EISAAGGHNL LFIGPPGSGK TMLARRLPGI
LPTLSFEEAL EVTRIHSAAG LLKERGHLIC DRPFRSPHHS ASGPSLVGGG SFPRPGEISL
AHRGVLFLDE LTEFKREVLD FLRQPLEDGQ VMISRTRQSV AFPARFTLVA SANPCPCGYY
GDTLQPCTCG LNQRQRYWSR LSGPLLDRID LQVSVQRLPP TDLARSQLGE STAIVRDRVA
QARQRAQQRF QGRLRCNAEM QSADLRHWCA LTEPTTALLE KIITKLRLSG RSTARILKVA
RTIADLDGSE QLQSQHLAEA AQYRGLDRLV ER