Gene Synpcc7942_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1390 
Symbol 
ID3774103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1435722 
End bp1436066 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content55% 
IMG OID637799822 
Productprotein kinase C inhibitor 
Protein accessionYP_400407 
Protein GI81300199 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000527818 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG ACACCATCTT TGGCAAGATC ATCCGGCGCG AGATTCCAGC AGACATTGTT 
TATGAAGATG ATCTCTGTCT GGCTTTTCGA GATGTGGCAC CCCAAGCGCC GGTTCACATT
CTGGTGATTC CCAAGCAACC AATTGCCAAC CTTTTGGAAG CGACAGCAGA ACATCAAGCG
CTGCTGGGTC ATTTGTTGCT GACTGTAAAG GCGATCGCGG CCCAAGAAGG ACTCACCGAG
GGCTACCGCA CCGTGATTAA CACGGGCCCT GCGGGTGGGC AAACCGTTTA CCACCTGCAT
ATTCACTTAC TGGGCGGGCG ATCGCTGGCT TGGCCGCCCG GCTGA
 
Protein sequence
MSEDTIFGKI IRREIPADIV YEDDLCLAFR DVAPQAPVHI LVIPKQPIAN LLEATAEHQA 
LLGHLLLTVK AIAAQEGLTE GYRTVINTGP AGGQTVYHLH IHLLGGRSLA WPPG