Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1389 |
Symbol | |
ID | 3774102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1434538 |
End bp | 1435620 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799821 |
Product | photosystem q(b) protein |
Protein accession | YP_400406 |
Protein GI | 81300198 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000163699 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACTG CATTGCAGCG GCGCGAGAGC GCCAGCCTGT GGCAGCAGTT CTGCGAGTGG GTAACCAGCA CCGACAACCG CCTCTATGTG GGTTGGTTCG GCGTGCTGAT GATCCCCACT CTGCTGACCG CCACCATCTG CTTCATCGTT GCGTTCATCG CAGCACCTCC CGTTGACATC GACGGCATCC GCGAGCCCGT TGCTGGCTCC TTGATGTATG GCAACAACAT CATCTCTGGT GCTGTTGTTC CTTCTAGCAA CGCCATTGGT TTGCACTTCT ACCCGATCTG GGAAGCCGCT AGCCTCGACG AGTGGCTGTA CAACGGTGGT CCCTACCAAC TGGTAGTGTT CCACTTCCTG ATCGGCGTCT TCTGCTACAT GGGCCGTGAG TGGGAACTGT CGTACCGCCT CGGTATGCGT CCCTGGATCT GTGTTGCATA CAGCGCACCG GTTGCAGCAG CGACTGCAGT GTTTCTGATC TACCCGATCG GCCAAGGTTC GTTCTCGGAC GGCATGCCCC TGGGTATCAG CGGCACCTTC AACTTCATGT TCGTGTTCCA AGCAGAGCAC AACATTTTGA TGCACCCCTT CCACATGCTG GGTGTGGCTG GTGTGTTCGG TGGTTCGCTG TTCTCGGCAA TGCACGGTTC GTTGGTGACC AGCTCGCTGG TGCGTGAGAC GACCGAGACC GAGAGCCAAA ACTACGGCTA CAAATTTGGT CAAGAGGAAG AGACCTACAA CATCGTGGCA GCCCACGGTT ACTTCGGTCG CTTGATCTTC CAATACGCAT CGTTCAACAA CAGCCGTTCG CTGCACTTCT TCCTGGCTGC ATGGCCGGTT GTGGGCATCT GGTTCACGTC CTTGGGCATC AGCACCATGG CGTTCAACCT GAATGGTTTC AACTTCAACC AGTCGGTTTT GGATAGCCAA GGCCGTGTGA TCAACACCTG GGCAGATGTG TTGAACCGTG CCAACTTGGG CATGGAAGTG ATGCACGAGC GTAATGCTCA CAACTTCCCC CTCGATTTGG CAGCAGGCGA AGCGACCCCG GTTGCTCTGA CTGCACCTGC AATCAACGGC TAA
|
Protein sequence | MTTALQRRES ASLWQQFCEW VTSTDNRLYV GWFGVLMIPT LLTATICFIV AFIAAPPVDI DGIREPVAGS LMYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PYQLVVFHFL IGVFCYMGRE WELSYRLGMR PWICVAYSAP VAAATAVFLI YPIGQGSFSD GMPLGISGTF NFMFVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTET ESQNYGYKFG QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTSLGI STMAFNLNGF NFNQSVLDSQ GRVINTWADV LNRANLGMEV MHERNAHNFP LDLAAGEATP VALTAPAING
|
| |