Gene Synpcc7942_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1388 
Symbol 
ID3774101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1433659 
End bp1434372 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content59% 
IMG OID637799820 
Productcarbonate dehydratase 
Protein accessionYP_400405 
Protein GI81300197 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3338] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000301506 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGC GATCGCTCCT AGCAGCTCTT GGCGGCAGCT GCATCGGTTG GTTGGGCAGC 
AGTCAACCCG TCTGGGCCAG TGCAGACTGG GACTATAGTC GCCGCCGAGG TCCTCGCCAG
TGGGCCAAGC TTGATCCGGC CTATGCCATT TGTCAGCAGG GTCGTCAACA ATCCCCAATT
AACCTGACGG GTCAGCCTGA CAGAACACCA CTGGATTACC GCGATCGCCC GTTTAAGGGC
ATTCTGCAGC AGGCTCCCCA TTCCCTCCGC ATTGACTGTC CAGCTGGGAA TGGTTTCTGG
GAAGCTGGCA CCTTCTATGA GCTGCTGCAA TTTCACTTCC ACACGCCCAG TGAGCACCAG
CACCAAGGCC AACGTTTCCC AGCAGAAATT CATTTCGTCC ATCGCAGCGA TCGCGATCAG
CTCGCTGTGG TTGGTGTTTT TCTGGCAGCG GGCGATCGCC CCCTTCCGAT TCTGGACACC
CTCTTAGCCG TGCCACCGTC AACTGACAAT CAACTGCTTT CAACAGCCAT TCAACCGACA
GACCTCATGC CCCGCGATCG CACCGTCTGG CGCTACTCTG GGTCTCTAAC AACCCCACCC
TGCTCTGAAC CCGTTCTCTG GCGGGTCTGC GATCGCCCAC TGTTTGTAGC TCGGCAACAA
CTCCGGCAGC TCCGGCAACG GTTGGGTATG AATGCTCGAC CACTGCAAGC CTAA
 
Protein sequence
MRRRSLLAAL GGSCIGWLGS SQPVWASADW DYSRRRGPRQ WAKLDPAYAI CQQGRQQSPI 
NLTGQPDRTP LDYRDRPFKG ILQQAPHSLR IDCPAGNGFW EAGTFYELLQ FHFHTPSEHQ
HQGQRFPAEI HFVHRSDRDQ LAVVGVFLAA GDRPLPILDT LLAVPPSTDN QLLSTAIQPT
DLMPRDRTVW RYSGSLTTPP CSEPVLWRVC DRPLFVARQQ LRQLRQRLGM NARPLQA