Gene Synpcc7942_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1387 
Symbol 
ID3774100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1432853 
End bp1433680 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content57% 
IMG OID637799819 
Producthypothetical protein 
Protein accessionYP_400404 
Protein GI81300196 
COG category[R] General function prediction only 
COG ID[COG1606] ATP-utilizing enzymes of the PP-loop superfamily 
TIGRFAM ID[TIGR00268] conserved hypothetical protein TIGR00268 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000185278 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.88629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGG CCAAACTTGA GCAGGTGCGA TCGCAACTTC GATCGTTTCC CTCGGCCTTG 
GTGGCCTACT CTGGAGGCAT TGATAGCAGC CTCGTTGCTT ACCTTGCAGC TCAGGAGTTA
GGCGATCGCG CGATCGCCGT TACGGCTGTT TCCGCCTCCT TGTTGCCGGA AGATCTTGAA
GCGGCGCGAT CGCAGGCGGA ATGGATGGGC ATTGCTCACG AGCAAATTCA GACCGATGAG
TTAGCGAATC CTAACTACGC CAGTAATCCC AGCAATCGCT GCTATTTCTG CAAAAGCGAG
CTGCACGATC GCCTCCAGCC TCTTGCCCAA AGTCGCGGGT TCGCTGTGGT TCTGGATGGC
GTCAATGCTG ATGACCTTGG CGATCACCGT CCGGGTTTAC AAGCCGCAGC GGAACGAGGC
GTGCGATCGC CCCTCGCTGA GGCCGGCATT AGCAAGCTCG AAGTCCGGCA GTTGGCCCGA
GAACTGGGGA TGCCTTGGTG GGATAAACCA GCCATGCCCT GCCTGTCCTC CCGTTTTCCC
TACGGTGAAG CGATCACTGC TGAGAAACTG GCGCGGGTCG GGGCTGCCGA ACGCTATCTG
CGCCAACTCG GCTGGCAATC AATCCGAGTG CGATCGCAAC AGGATACGGC TCGGATTGAA
TTGCCTAGTA CTGATTTGCA GCGGTTTGTG GCCGAGACTG ATTTGCCAGT CTTGGTCAGC
CATTTTCAAT CCTTGGGGTT TCGCTACGTC AGCCTTGATC TGGAAGGTTT GGTCAGTGGC
AAACTCAATC GCGCTTTGAC TGCAGCATGC GCCGGCGATC GCTCCTAG
 
Protein sequence
MLQAKLEQVR SQLRSFPSAL VAYSGGIDSS LVAYLAAQEL GDRAIAVTAV SASLLPEDLE 
AARSQAEWMG IAHEQIQTDE LANPNYASNP SNRCYFCKSE LHDRLQPLAQ SRGFAVVLDG
VNADDLGDHR PGLQAAAERG VRSPLAEAGI SKLEVRQLAR ELGMPWWDKP AMPCLSSRFP
YGEAITAEKL ARVGAAERYL RQLGWQSIRV RSQQDTARIE LPSTDLQRFV AETDLPVLVS
HFQSLGFRYV SLDLEGLVSG KLNRALTAAC AGDRS