Gene Synpcc7942_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1384 
Symbol 
ID3775578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1430438 
End bp1431283 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content55% 
IMG OID637799816 
Producthypothetical protein 
Protein accessionYP_400401 
Protein GI81300193 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0928654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.157353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGGT GGAGCAGTTC TCTCAGCAGT ACTTTGGGAT TGAGCTTGAG TGCGCTGGTA 
TTCGGAGCAA CTGCGATCGC TCAGCCGCTA CGGCTCAGTG CCGCCCCTGA GCCATCTAAG
CTAGAAGACA TCACCTGGGA ACTCATCAGT TTCCGTCAAG TGAATGGTGA GCAGCTGGCG
GCGGTCGCTC CTGAGCAGAA AGCAAGCCTC CGCTTGCAAT CAGGCCAAAC GACTCCACAA
CTCCAGGGCA ACACTGGCTG TAATTCCTTC TTTGGTAGCT ATCGTCTCGA GTCCAACACC
AATCAGTTGC AGATTAAACC CGTAGGCTCA ACCCTACGGG CCTGTCTTTC GACAGCGCTC
AGTCAGCAAG AACAAGCCTT ACTTACGGGA CTTGCCCAAG TCACGACCTA TCGCTTAGAG
GGCGAGCGCC TGCAACTCCA GAATTCAGCC CAGCAAGTTC TCTTCACCTT GCGTCCCCAG
CCGATGATTG CTTTGACCCA AACCCAGTGG CAGTTGCAGC GCTACAACAA TGGCGAAGGG
GCTTTGATAC CGCCGATTGC CGACACTGAC GTGACGGCTC AATTTGCAGC AGACAGTCAA
CGGCTTTCAG GATTCACCGG CTGTAATCGC TATTTCGCCA CTTACAAAGT CCAGCAGCAA
CAGCTCACAG TCGGGGCGAT TGGCAGTACC CGCATGGCCT GTGGCAGAGA TCAGGCTACC
CAAGAGCAAG CCTTCCTGCA GTTGCTGGCT GCTTCGCATT CTTACCAATT GGAGGGCGAT
CGCCTGGAGT TATACGACGC CCAACAACAG TTACTGGCGG TCTTCGGCGC AAAGGCCGGT
TCCTGA
 
Protein sequence
MSGWSSSLSS TLGLSLSALV FGATAIAQPL RLSAAPEPSK LEDITWELIS FRQVNGEQLA 
AVAPEQKASL RLQSGQTTPQ LQGNTGCNSF FGSYRLESNT NQLQIKPVGS TLRACLSTAL
SQQEQALLTG LAQVTTYRLE GERLQLQNSA QQVLFTLRPQ PMIALTQTQW QLQRYNNGEG
ALIPPIADTD VTAQFAADSQ RLSGFTGCNR YFATYKVQQQ QLTVGAIGST RMACGRDQAT
QEQAFLQLLA ASHSYQLEGD RLELYDAQQQ LLAVFGAKAG S