| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1375 |
|---|
| Symbol | |
|---|
| ID | 3775569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1415985 |
|---|
| End bp | 1416506 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637799807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400392 |
|---|
| Protein GI | 81300184 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.40169 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCG ATCTGCTCGT GATTAGTGCC AGCAATGGCG AGAATCTCAA GCTGGCAAAC
CGTTTTGCAG AAACAGGTTC GGCCCAAGGA TTAACAAGCA CTGTTTTAGA CCTAACGGCC
GTTGATTTAC CGCTTTACAC CCCTCGGCAG CAGGCTAACC AAGGGTTCCC CAGTAATTTA
TCCAGCCTGA GCCAACAGCT GGATGCGGCT CCCCGTTGGG TGCTCTGCGT ACCCGAGTAC
AACGGCTCGA TCCCGCCGGT TCTCACCAGT GCGATCGCGT GGCTGTCGGT GCAGGGCAAT
GACTTTCGTC GCCTGTTTAA TGGACGGCCA ATCGCGATGG CGACCTACTC TGGCGGGGGT
GGCCATACCG TCCTCACTGC CCTCCGGCTG CAGCTGGCTC ACCTCGGCGC CCATGTGGTC
GGTCGTCAGC TGGTCAGCAA CTCTGGGAAA CCGGCTCAGG ACAGCAGTAT CGAAGATTTG
ATTCTGCGGC TCCAAAATAT TCCCTACCAT CCCCTCGGGT AG
|
|---|
| Protein sequence | MTTDLLVISA SNGENLKLAN RFAETGSAQG LTSTVLDLTA VDLPLYTPRQ QANQGFPSNL
SSLSQQLDAA PRWVLCVPEY NGSIPPVLTS AIAWLSVQGN DFRRLFNGRP IAMATYSGGG
GHTVLTALRL QLAHLGAHVV GRQLVSNSGK PAQDSSIEDL ILRLQNIPYH PLG
|
|---|
| |