Gene Synpcc7942_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1373 
Symbol 
ID3775567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1413287 
End bp1413982 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content49% 
IMG OID637799805 
Producthydrogenase accessory protein 
Protein accessionYP_400390 
Protein GI81300182 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.695906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.247708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTA AATCAGGGCG ATCGCTCTCT TCACTACAAC GAAAACTCCA GAAAGTTAGT 
CTTTTCAGTG CACCAGTTTT ACTGCTTCTC TCGATAGCAT CACCTGCTTT TGCTCATCAT
GCTATGGGCG GACAAACACC CACCAGTATT TTTGAAGGAT TACTATCGGG ATTAGCCCAC
CCTATCATCG GCGTTGATCA CTTCGCATTT GTGATTGCTG TTGGTTTGCT GGCATCTGTA
ACTCGTCAAG GTTTTCTCAG TATTTTTGCC TTTGTGATCG CTGCTCTAAT TGGGACAGGA
TTGCACCTCG CTAATCTCAA TTTGCCTGGG GCTGAGCTGC TGATCTCTGG CTCAATTCTG
ATTTTTGGTT GCTTGCTGGC TCGCAAAAAA GCGTTGCCAG TTGCCGCGAT TGCAGGGCTA
GCCGCAATCG CGGGGCTTTT CCATGGCTAT GCCTACGGTG AAGCGATTAT TGGCGCTGGC
ATGCCGCCCC TGTTTGCCTA TCTAGTTGGC TTTACCCTGA CGCAACTCGT GATTGCTATT
TCGGCTTGGG CAGTGGGATG TACCTTGATT CGGCAACAAT CTGCAACCGA AAGCCTGACT
GCACCTTTGA AAACAAGTGG TCTAGTGCTG GTTGGAATTG GTCTTGCCTT CCTAACTTCT
GAGCTAATCA ATCTGGTCTT GCCAGCAGTC GCTTAG
 
Protein sequence
MQVKSGRSLS SLQRKLQKVS LFSAPVLLLL SIASPAFAHH AMGGQTPTSI FEGLLSGLAH 
PIIGVDHFAF VIAVGLLASV TRQGFLSIFA FVIAALIGTG LHLANLNLPG AELLISGSIL
IFGCLLARKK ALPVAAIAGL AAIAGLFHGY AYGEAIIGAG MPPLFAYLVG FTLTQLVIAI
SAWAVGCTLI RQQSATESLT APLKTSGLVL VGIGLAFLTS ELINLVLPAV A