Gene Synpcc7942_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1361 
Symbol 
ID3775555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1401085 
End bp1401588 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content53% 
IMG OID637799793 
Producthypothetical protein 
Protein accessionYP_400378 
Protein GI81300170 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTGC CCCGTCGATT CGGTTGGCGA TGGCTCTCGA TGGTGCTGGC GCTGGTTTTA 
GTTTTGGGGT TAGCTCACCC TGCGATCGCA GAGCCCGAAA CGAATAACTA CAGCAACTTG
ATTCGCAACG GCATCGATCT CTCCCACGAA GACTTGTCGG GGATGTTGTT CGTGTCGACC
GAGATGCGCA AAGCCAATCT AGAAGAGGCG AATTTGCGCA ATGCGATTCT GACTCTAGGA
GTCTTCTTGG ATGCCAATTT CCATGGAGCA GATCTGAGCG GTGCCTTACT CGATCGCGTC
TTTTTGGTGG GCGCTGATTT GACCGATGCC CTGTTGGTAG ACGTGACTGC TACTCGCACC
AGTTTTCAAG ATGTCAAGAT CACAGGTGCC GATTTCACAG ATGCAATCAT CGATCGCTAC
GAGCAGAAGC AGCTTTGCCT GCGGGCCGAC GGCGTTAACC CCAAAACAGG GGTAGCCACC
CGAGATAGTC TGGGTTGTGT GTGA
 
Protein sequence
MVLPRRFGWR WLSMVLALVL VLGLAHPAIA EPETNNYSNL IRNGIDLSHE DLSGMLFVST 
EMRKANLEEA NLRNAILTLG VFLDANFHGA DLSGALLDRV FLVGADLTDA LLVDVTATRT
SFQDVKITGA DFTDAIIDRY EQKQLCLRAD GVNPKTGVAT RDSLGCV