| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1355 |
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| Symbol | |
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| ID | 3775548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1388109 |
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| End bp | 1390898 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637799786 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_400372 |
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| Protein GI | 81300164 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.968718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATA GCGAAGTTCA CTGGCGGTTG CTCTTGGTCG ATGATGATGA GGATGATTTC
ATCATCACCC GTGACTTACT GCGCGATGCT CAACAGGCAC AGATCCAGTT GGACTGGTGC
TCCGACTTCC AAGAAGCATT GGCAACAATG GGCCGCCAAG AGCATGACGT ATATTTGGTG
GACTATCGAC TGGGTGCTGA ATCAGGATTA GACCTGATTG ACCAAGCAAT TCAGGCTGGG
ATTACCCGAC CTATTATTTT GCTGACGGGG CAGGGGAATG AACAGCTTGA TGCCTCTGCA
ATTGAACTTG GGGCTGCCGA TTATCTGGTC AAAGGACAGC TAGATTGTCA GCAATTGCTG
CGCAGCATTC GCTATGCCAT CGATCGCAAT TTAGCAACGA CTCGTCTGGC GGAAAGTGAA
TCCCGTTATC GGTTGCTATT TGAAGCTAAT CCAGAACCGA TGTGGGTTTT TGCCAAACAA
GGGTTGCAGT TTTTGGCGGT TAATCAAGCA GCTTCTCAAT TTTTTGGCTA CAGCCAGCAA
GAATTTCTTG CCATGACGGT TTTAGATATC CAGAGTGAGG AGGAAAAAAC ACGTTTTTTG
CAGTTTTTTG AATCGTTAAT CTGCAATCAA ATTGTTGATC CTGCTGTGGG AGTTTGGGCT
TATCGACATA AACAGGGGCA TCTAGTATTT GCTGATGTTC TCATCCATGA CTTTGAGTTT
GACAACCAAC CCTGCTGCCT TATTTTAGCA ATTGATATCA CCGAAAAACA AGCTGCACGG
GAGTTAGCCC ATCAGCGCGA ACAGGCTTTT CGGAAGCTAC TGAATGACAA TCGGGATCCA
CTACTAGTGA TTTCAGGCGA TCGCAGGATT TGCTATGCCA ATCCTGCAGC CCAAAAATTA
CTAAAGTTGA ATTTAGAACA ATTAGAATCT CAATCTTTAG ATCTACCGCT ACTGAGTGAC
AAGCTTACTG AGTGGGCCTT GACGTTGCCT GATGGCAGCG TAGCAGAGGT AGAGATTCAT
CGTTCAGAAA CTGATTGGGA AGGACAGCCT GCAGACCTGC TCTCACTTCG AGATATTGCT
GAGCGTAAGG CATCAGAACA GCAGCTTCGT TTGCTCAAAG AAAGTCTCGA AGCGAGCTTC
AACGGTGTTG TTATTGTAGA TGCAATCGAA CCTGACATGC CTGTGATCTA TGTCAATCCA
GCCTTTGAGC GAATCACGGG TTATTCTGAA GCTGAAATGC TAGGCAGAAA CTGCAGAATA
TTACAAGGCA ATGAGCGTGA CTCTCTCCAA ATTGAAGAAA TTCATCGCGG TCTCAGTCAG
GCTGAAAATG TTCATGTAGT CATCCGTAAT TTTCGAAAAG ACGGCCAACC ATTCTGGAAT
GATCTCTATA TTTCGCCTAT TTTTAATGCA CAAGGTAATG TCACTCATTT CATTGGAGTA
CAAAACGATA TTACAGAGCA AAAACGCTAC GAGGAAGAAC TAAGCTTCAG TGCTAGCCAC
GACGTTCTCA CAGGTTTACC AAATCGTGCT GTGCTCGAAG ACCGCTTACG GCAGGGTTGC
AAGATGGCCC TTCGCCAAAA GCATAGCCTT GCCATCCTCT TCATTGACTT AGATGGATTC
AAATTAATCA ATGACTCTAT TGGCCATCGC TCAGGTGACT TGCTACTTGT TGAAGTCGCT
CAGCGCATGT GTGAACAAGT GCGGGCGGGT GACACAGTTG CACGTATCGG AGGAGACGAA
TTTATCATTC TTTTAGTTGA TTTAAAACTT GAAAATGATG TTATTTCAAT TGCCGATCGC
CTACTTGCTA GTGTTGCTCG TCCCTATCAT ATTCAAGGAA TTTATCTGCA TGTAACGGCC
AGTATGGGGA TCACCCTGAG TGACGGTGAT ATTGAACAAC CCACTCAGTT GATCCAACAA
GCTGATCTGG CAATGTACAA GGCTAAGCAA GAAGGTCGCA ATAATTATCA GTGGTATACC
AACGACCTAA ACCTACGGCT ACGCGAACGA GTTCATCTAC GCAATGAGCT GCAAAAGGCA
ATTGAGACAG AAGCCTTTGA GTTGTACTTT CAGCCCAAAA TAGAGGGTTG TAGTGGGCAA
GTGATCGGTC TGGAAGCCTT GTTGCGTTGG CAACATCCCC AAATGGGATT TATTTCTCCT
GCCACATTTG TACCGATCGC CGAGGATACT GGGCAAATAA TTCCCCTGAG CCAATGGGTT
TTGGAGACTG CTTGTCGACA GCTCCGAGAC TTATTACAGC AAGGAATAGC AGCCCCATCC
GTAGCAGTTA ATATCTCAAC CGTTCAATTT CGACGCATTA ACTTCGTTAA GAGTGTTCAA
TCTGCTTTGC AAAAGTATCA GCTTAAGTCA GAACATTTAG AGATAGAGAT TACTGAGAAT
GTTTTGTTTG ACAACACCGA GAAAGCGATC GAGAAATTGC AGCGACTCAA AGAATTAGGA
GTAAATATTT CGATCGATGA CTTTGGAACT GGATTTTCAA GTCTGAGCTA CCTTAAAGAA
CTACCCATTG ATACTGTCAA AATCGACCGC TCATTCGTCC AAGAGATCAA CACTGACTCT
CGTGATGCAG CTATCACCCA AGGAATCATT TCGATGGCTC ACCACCTGCG ACTCAATGTT
GTTGCGGAAG GGGTTGAGAC TGAGCAACAG TTCAAGTTTC TCCAGCAGAG CAACTGTGAC
CAATACCAGG GCTATTATTT TGCCAAACCG ATGCCCTTCG AAGCATTGAA GCAATATTTA
ATGGATGAAG CTGCGCGCGA ACTTCCATAA
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| Protein sequence | MTYSEVHWRL LLVDDDEDDF IITRDLLRDA QQAQIQLDWC SDFQEALATM GRQEHDVYLV
DYRLGAESGL DLIDQAIQAG ITRPIILLTG QGNEQLDASA IELGAADYLV KGQLDCQQLL
RSIRYAIDRN LATTRLAESE SRYRLLFEAN PEPMWVFAKQ GLQFLAVNQA ASQFFGYSQQ
EFLAMTVLDI QSEEEKTRFL QFFESLICNQ IVDPAVGVWA YRHKQGHLVF ADVLIHDFEF
DNQPCCLILA IDITEKQAAR ELAHQREQAF RKLLNDNRDP LLVISGDRRI CYANPAAQKL
LKLNLEQLES QSLDLPLLSD KLTEWALTLP DGSVAEVEIH RSETDWEGQP ADLLSLRDIA
ERKASEQQLR LLKESLEASF NGVVIVDAIE PDMPVIYVNP AFERITGYSE AEMLGRNCRI
LQGNERDSLQ IEEIHRGLSQ AENVHVVIRN FRKDGQPFWN DLYISPIFNA QGNVTHFIGV
QNDITEQKRY EEELSFSASH DVLTGLPNRA VLEDRLRQGC KMALRQKHSL AILFIDLDGF
KLINDSIGHR SGDLLLVEVA QRMCEQVRAG DTVARIGGDE FIILLVDLKL ENDVISIADR
LLASVARPYH IQGIYLHVTA SMGITLSDGD IEQPTQLIQQ ADLAMYKAKQ EGRNNYQWYT
NDLNLRLRER VHLRNELQKA IETEAFELYF QPKIEGCSGQ VIGLEALLRW QHPQMGFISP
ATFVPIAEDT GQIIPLSQWV LETACRQLRD LLQQGIAAPS VAVNISTVQF RRINFVKSVQ
SALQKYQLKS EHLEIEITEN VLFDNTEKAI EKLQRLKELG VNISIDDFGT GFSSLSYLKE
LPIDTVKIDR SFVQEINTDS RDAAITQGII SMAHHLRLNV VAEGVETEQQ FKFLQQSNCD
QYQGYYFAKP MPFEALKQYL MDEAARELP
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