| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1354 |
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| Symbol | |
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| ID | 3775547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1386587 |
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| End bp | 1388083 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637799785 |
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| Product | putative export protein |
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| Protein accession | YP_400371 |
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| Protein GI | 81300163 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.338095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAA TCATTCAAAA AATCCGGGAT TTTTGGAGCG GTACCCAAGG TGAGAATCAC
TGTTGGTGGG CGTTAGCAGC AGTGGAATGC GGCAACTTCG TAGTGTACAT GGATGGGTTC
ATTGTCACCC TGGCCCTGCC TGCGATGGCG CGTCATTTCG ATGTTGGCCT TCCCATTCTT
AAATGGGTGG TTGTTGCTTA CCTACTCGCG GTGACGGTGA CGCTGCTACC CGCTGGTCGA
CTAGCGGATA TTTGGGGCCG TAAACGCATC GTTGTTATCG GCATGAGTGT TATTTTCATC
AGCGCTTGGC TCTGCATGCT GGCGCCGACA GTCAAGATAC TCATTGCTTG CCGAGTCATT
CAAGGCATTG GTGGCGGGCT AGTTTTAGCA AACGTGATGG CTGAAATCAC TGCTGTCTTT
CCCAAGCAAG ATCAACGTAA GGCAATGGCT GTTAATGCTT CGGTCTTGGC TCTTTCTCAG
GTCACAGGAC TGGTTCTTGG CGGACTCTTT ATTGTTCAAT TTGGCTGGCG ATCGCTCTTT
CTAATCATCC TGCTGGTGAG CCTGCTCGGA CTGATCTTGA GCATAGGGAT TCTAAAATTG
CGTTCCCGAA CTCAAGGCCG AGCATCATTG GACTGGATAG GAGCTCTCCT TGCTATTGGG
GCTACAAGTG CACCCTTTAT CTTCGTTGAA GAACTCTCAA AGAATTTGCT AAACCCCTCC
AGCTTGCTGC TCTTGGCGGT AGGAGTGGTC GCGCTGCTTT TGTTCGTGTT TGTAGAACAG
CGTGTCCGGC AGCCTCTGCT AAACCTCAGC CTATTTCGAT CTAGAGCATT TACGTGCGGC
TCTGCTTCGG CTGCTTTTTA CTTTGTTTCG GCAGTATCCT GCTACTTTTT CCTACCCCTA
TACGCTCAGC TCGTGTTGGG GCTATCGCCG GTTATGGCGG GTGTTCTGCT GATCCCGCTC
TCAGTGGCGA TTACGGTTAC AAGTTTAACG ATCGGTCGCC TAGGTAATCG CTTTAGTGCT
CGGACTCTCA GCACCATAGG TCTGCTCTGC GTTAGCGTTG CCTTGCTCGG CTTGTCCTCA
TTGGGCGCCA ACGCATCCTC GACTGCAATC ATTGCGCCGT TGATACTGCA AGGCATGGGT
GGCGGTCTAT TCAATCCCCC TAACAACACA GCCACGCTCA ATCAGGTCCC ACCGGAAAAT
CTCAGCGTTG CTAACGGATT CTTGTCGACA TCACGCAACT TTGGGCAGGC GATTGGAGCA
GCGATCGCAG CAACACTCCT AGCCCAAGGG CTCAGTGCAG CTGGTGCGGG AGATGCTCTA
GCAGGAGCAG CAGGCGTGCG GCTGAGCGGG TTTCAATTAG AGGCATTTTT GAGTGCACAG
CGGTCTGCTT TTCAATTGGC TGCAACACTA GGATTGGTGG GTGCTGTAAT TTCAGTGCTC
CGCCCCAGAA GAGCGCCAAC TGCCGCTTCG CTAAAGAGTT CGGGTACTGC CCAATGA
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| Protein sequence | MNQIIQKIRD FWSGTQGENH CWWALAAVEC GNFVVYMDGF IVTLALPAMA RHFDVGLPIL
KWVVVAYLLA VTVTLLPAGR LADIWGRKRI VVIGMSVIFI SAWLCMLAPT VKILIACRVI
QGIGGGLVLA NVMAEITAVF PKQDQRKAMA VNASVLALSQ VTGLVLGGLF IVQFGWRSLF
LIILLVSLLG LILSIGILKL RSRTQGRASL DWIGALLAIG ATSAPFIFVE ELSKNLLNPS
SLLLLAVGVV ALLLFVFVEQ RVRQPLLNLS LFRSRAFTCG SASAAFYFVS AVSCYFFLPL
YAQLVLGLSP VMAGVLLIPL SVAITVTSLT IGRLGNRFSA RTLSTIGLLC VSVALLGLSS
LGANASSTAI IAPLILQGMG GGLFNPPNNT ATLNQVPPEN LSVANGFLST SRNFGQAIGA
AIAATLLAQG LSAAGAGDAL AGAAGVRLSG FQLEAFLSAQ RSAFQLAATL GLVGAVISVL
RPRRAPTAAS LKSSGTAQ
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