Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1349 |
Symbol | |
ID | 3775542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1381367 |
End bp | 1382053 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799780 |
Product | hypothetical protein |
Protein accession | YP_400366 |
Protein GI | 81300158 |
COG category | [R] General function prediction only |
COG ID | [COG3150] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.108709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCT ACTTCTACCT GCATGGTTTT GCCTCGGGGC CAGAATCGGC TAAGGCCAAG TATTTACGCG GCTGCTTTCA GCGGCTAGGC CTAGAGCTGA TCTGCCCAGA CTTTAACGAG CCCGACTTTT CCAGCCTGAC CTTCAGTCGT CAAGTAGCCC AAGTCGAAGC GCAACTGACC GATGAGCCGA CGATCGTGAT TGGATCTAGT CTGGGCGGAC TGACGGCTGC TTGGCTAGGG CAGCGCAATC CCCAGATCCA GAAGCTCGTT TTGCTTGCAC CGGCTTTTGA ATTTCTGGCT CAGTGGTTGC CGCGTATGGA TGACTCCGCT CTAGCGCAGT GGCAGCAAGC AGGGTTTCGT CCGGTTTACC ATTGGCGCGA TCGCGATTTT CGTCCTCTTC ATTGGCAATT TGTGGAAGAC CTGCATCGCT GGCAAGATCA AGATTTAAAG CGATCGCTGC CCACCTTGAT CCTGCATGGC ACGGCGGATG AAGTGATCGA TTTTGCCGCG AGCGAGCGAT TTGCCGTCCA GCGGCCTTGG GTGACGCTGC AAGCGCTGAC CAGTGATCAT GCCTTGGGCA ATGTCAGTTC GCAAATTTGG CGCGCCTGCC GGCAGTTTGC CGAACTTTCC GTCTGCGATC GCGGAGCGTT GAGTCAGAAG AGCATTCCGG GCAATCGCCT ATCCTGA
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Protein sequence | MTRYFYLHGF ASGPESAKAK YLRGCFQRLG LELICPDFNE PDFSSLTFSR QVAQVEAQLT DEPTIVIGSS LGGLTAAWLG QRNPQIQKLV LLAPAFEFLA QWLPRMDDSA LAQWQQAGFR PVYHWRDRDF RPLHWQFVED LHRWQDQDLK RSLPTLILHG TADEVIDFAA SERFAVQRPW VTLQALTSDH ALGNVSSQIW RACRQFAELS VCDRGALSQK SIPGNRLS
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