| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1347 |
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| Symbol | |
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| ID | 3775540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1380019 |
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| End bp | 1381014 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637799778 |
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| Product | 2-hydroxyacid dehydrogenase-like |
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| Protein accession | YP_400364 |
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| Protein GI | 81300156 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.290853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTG CCTTCTTCAG CAGCAAAGCC TACGATCGCA CCTTTTTTGA GGCAGCCAAC
GCTGACTATG GCCACGACCT GCAGTTCTTC GAGACGGGGC TCTCTCTAGG AACTGTTCAA
CTTGCTACGG GTTTCCGCGC TGTCTGTAGC TTCGTCAACG ATCGCCTTGA CGCCATCACC
CTAGAAGCGC TGGCAGAGCT GGGCGTGGAA CATGTTGCCC TGCGCTGTGC TGGGTTCAAT
CAGGTCGATT TAAGCGCCGC TGAACGCTTG GGCCTCAGGG TAGTGCGTGT ACCGGCCTAC
TCGCCCCACG CCGTTGCAGA ACATGCGATC GCGTTGATCC TGACGCTCAA TCGCAAAATC
CATCGCGCCT ACGCCCGCAC CCGCGAAGGC AACTTTGCCC TGGATGGTTT GGTGGGCTTT
GACCTGAATG GTTGCACCGT TGGCATCATT GGCACGGGAC GAATTGGGGC TGTGCTGACG
CAAATTCTGC GCGGCTTTGG CTGTCATGTT CTCGCCCATG ACTTGGTGGA AAATCCCGAC
TGTCTGGCAG CGGGGGCTGT CTACACCGAC CTTGATCAGC TCTGGCAAGA GGCTCAAATC
ATCAGCCTGC ACTGCCCGCT TACACCCCAG ACCTATCACC TAGTCAATCG TGAGGCGATC
GCCAAAATGC AGCCCGGCAC AATGCTGATC AACACCAGTC GTGGCGGTTT AGTCGATACC
CAAGCGGTGA TTGAAGGCCT AAAACTCAAG CGGATCGGGG CGCTGGGCCT AGATGTCTAC
GAACAAGAAG AACCGCTATT TTTCCAAGAC CACTCGACAG AAATCATTCA CGATGACGTC
TTTCAGCGCT TGTTAACCTT CCCCAATGTC GTGATCACGG GTCATCAAGC CTTTTTGACG
GATACGGCTC TCCACAACAT TGCCGAAACC ACTCTCAGCA ATCTGACCGA TTTAGAGCAG
GGTCGAGCCT GTCCCAATCA GCTGTTCGCT GGGTGA
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| Protein sequence | MKVAFFSSKA YDRTFFEAAN ADYGHDLQFF ETGLSLGTVQ LATGFRAVCS FVNDRLDAIT
LEALAELGVE HVALRCAGFN QVDLSAAERL GLRVVRVPAY SPHAVAEHAI ALILTLNRKI
HRAYARTREG NFALDGLVGF DLNGCTVGII GTGRIGAVLT QILRGFGCHV LAHDLVENPD
CLAAGAVYTD LDQLWQEAQI ISLHCPLTPQ TYHLVNREAI AKMQPGTMLI NTSRGGLVDT
QAVIEGLKLK RIGALGLDVY EQEEPLFFQD HSTEIIHDDV FQRLLTFPNV VITGHQAFLT
DTALHNIAET TLSNLTDLEQ GRACPNQLFA G
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