Gene Synpcc7942_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1344 
Symbol 
ID3775537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1378378 
End bp1378986 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content56% 
IMG OID637799775 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_400361 
Protein GI81300153 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR00403] NADH-plastoquinone oxidoreductase subunit I protein
[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAT TTCTGAAGCA AGTCGGAGAC TACGCCAAGG AAAGTCTCCA AGCTGCTAAA 
GCGATCGGCC AAGGTTTGGG GGTTACCTTT GACCACATGC AGCGGCGTCC AGTCACGGTG
CAGTATCCCT ACGAAAAGCT GATTCCGTCG GAGCGCTACC GCGGCCGCAT TCACTACGAA
TTCGACAAGT GCATCGCCTG CGAAGTCTGC GTTCGAGTCT GCCCGATCAA CCTGCCGGTA
GTGGACTGGG TCTACAACAA AGAGACCAAG AAGAAAGACC TCAAGAACTA CAGCATCGAC
TTTGGGGCTT GTATTTTCTG CGGCAACTGC GTCGAGTACT GCCCGACCAA CTGCCTGTCG
ATGACGGAAG AATATGAGCT GGCAACCTAC GATCGCCACG AGCTGAACTA CGACAATGTT
GCCCTCGGTC GTCTGCCCTA CAAAGTGACC GATGATCCAA TGGTGACGCC CTTCCGAGAG
TTCGCTTACT TGCCCAAAGG CGAGTATGAC CCCCACGTGG TGCCGAGCGA TCGCCCCCGG
GCGGGCCAGC GTCCCGAAGA ACTCGTCGAT CAGTACAAGC AGGCTGCTGC CGCTAACGAG
GAGAACTAG
 
Protein sequence
MLKFLKQVGD YAKESLQAAK AIGQGLGVTF DHMQRRPVTV QYPYEKLIPS ERYRGRIHYE 
FDKCIACEVC VRVCPINLPV VDWVYNKETK KKDLKNYSID FGACIFCGNC VEYCPTNCLS
MTEEYELATY DRHELNYDNV ALGRLPYKVT DDPMVTPFRE FAYLPKGEYD PHVVPSDRPR
AGQRPEELVD QYKQAAAANE EN