| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1340 |
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| Symbol | def |
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| ID | 3775533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1374061 |
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| End bp | 1374639 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637799771 |
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| Product | peptide deformylase |
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| Protein accession | YP_400357 |
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| Protein GI | 81300149 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.457747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCTG CTGTCGCCAT TCGGGTTGCC AAAAAGAAAC TGGCGAAGCC TCCTCTCGAT
CTCCACTACC TCGGCGATCG GGTGCTGCGA CAGCCCGCCA AACGGGTCAG CCGGATTGAC
GATGAATTGC GGCAAACGAT TCGGCAGATG TTGCAAACCA TGTACAGCGC TGATGGCATT
GGTTTGGCAG CCCCCCAAGT GGGCATCAAT AAGCAATTGA TTGTGATTGA CCTCGAACTC
GAGGATGAAC AAGCACCACC CCTCGTCTTG ATCAATCCCA AAATTGAACG CACTGCTGGT
GATCTGGAGC AATGCCAAGA AGGCTGTCTG AGCATCCCCG GCGTCTATCT GGATGTAGAA
CGACCCGAGA TCGTTGAAGT CTCCTACAAG GATGAGAACG GCCGGCCGCA GCGACTCGTT
GCCGATGGTC TCCTTGCTCG CTGCATTCAG CACGAGATGG ATCACCTCAA CGGTGTGCTC
TTTGTCGATC GCGTTGAAAA TCGCCTTGAG CTGAACGAAG CCCTCGACAA AAAAGGCTTT
GCAGTCCAAG CGGTTCGCCC TGTCGCCGCT GCCAGCTAA
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| Protein sequence | MTAAVAIRVA KKKLAKPPLD LHYLGDRVLR QPAKRVSRID DELRQTIRQM LQTMYSADGI
GLAAPQVGIN KQLIVIDLEL EDEQAPPLVL INPKIERTAG DLEQCQEGCL SIPGVYLDVE
RPEIVEVSYK DENGRPQRLV ADGLLARCIQ HEMDHLNGVL FVDRVENRLE LNEALDKKGF
AVQAVRPVAA AS
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