Gene Synpcc7942_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1338 
Symbol 
ID3775531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1372863 
End bp1373645 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content58% 
IMG OID637799769 
Producthypothetical protein 
Protein accessionYP_400355 
Protein GI81300147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.193609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC CCTTCTTTCT GCCCCTAGCG GCGCTGGCCG GTACCCTTCT GACGAGTTTG 
ACCCCTCTTA CGCCGCAGGC ACGGGCGGCT CAGTTCGGGC AAGCTGAGGT CGATCAGAGT
AAATTTGTCT TAGCTGCTTC ACCGATCGGC AACGGTAGTC GCCATCAGTT ACTGATCATT
GAACAGGTCA AAAGCACCCG TCCTTGCTGG GTGGAAGAGG CAGGTACCCC AACACGTATC
AATCCGCTGT TGTTGACCTT CGACTTCTCT GGCATTTGCG ATCGCAAGAT CGACAGCAAT
GGCTACTCCC TGCGAATTGC TGGAGTAGAT CTCGGTTTAA ACTACCGCCT CAGCATTGTT
CGCCGTAATG GCCAAATGGT GTTGGTTGGT CAAGCCTTTC GCAGTGGTCC TGAGCTGGTG
ATTGCGACGG CCAATGGGGA ATCTGCCGGC TTTACTAAGC TGGAACTGCA ACCGGGCTGG
CGCTTGGGTC GTCGGACTTT TGATGGCAAA GCCTTGGGTC ATATCTATTT AGTGACCGAT
CAGATCCCGC CCGGCATGGC CCTACAAGGT GCTCAGACCA GTCCGAGTGC TGCGGTGGTT
CCTCCAGCTA ACGTGACCAC ACCGGTTAAA CCAGCCCCTG CACCTGCTTC ATTGCAACAA
CCAGTGCCTC CCCGGCCGCT CCCTAGTGCA AGTCAAGCCC CTGCCCCCAC GCTCCGGCCT
CTGACTCCCC CGCGGCTAAC CCCGCTGCGT CCCTTGCGCC CGTTGACCCC AACCCAGCCG
TAA
 
Protein sequence
MRIPFFLPLA ALAGTLLTSL TPLTPQARAA QFGQAEVDQS KFVLAASPIG NGSRHQLLII 
EQVKSTRPCW VEEAGTPTRI NPLLLTFDFS GICDRKIDSN GYSLRIAGVD LGLNYRLSIV
RRNGQMVLVG QAFRSGPELV IATANGESAG FTKLELQPGW RLGRRTFDGK ALGHIYLVTD
QIPPGMALQG AQTSPSAAVV PPANVTTPVK PAPAPASLQQ PVPPRPLPSA SQAPAPTLRP
LTPPRLTPLR PLRPLTPTQP