Gene Synpcc7942_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1328 
Symbol 
ID3775521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1361167 
End bp1361559 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content56% 
IMG OID637799759 
Producthypothetical protein 
Protein accessionYP_400345 
Protein GI81300137 
COG category[S] Function unknown 
COG ID[COG4828] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGC TTGCCCCTTT TGAATATGGC CTTGCTGTCT TGGCAATGGG CATTCGCCTC 
TGCCTCGAGA GCCTGTCTGT GCTTTGTGTG GTGGCTGGAC TGCTGTCAAC GCTCCGGCTT
AGCGGTCTGC TCCGCAGACA GTTTTGGCGT AATGAACCCC CATTCACCAG GATTCGCCTG
ACTTTTGGCG GCTGGCTTTC CTTGGCCTTG GAGTTTCAAC TCGGCGCCGA TATTGTGGCG
ACCACCACAT CGCCCAGCAC ACGATCGCTG CTTCAACTGG GGGCGGTAGC ACTGATCCGA
ACCTTTCTCA ATTTTTTTCT GGCACGGGAA ATGGAGATGG AGCAGAGGCT AGAACAGCAA
ACTCAAGGCG CGCAGGCTGA GTCGACCCAC TAA
 
Protein sequence
MPELAPFEYG LAVLAMGIRL CLESLSVLCV VAGLLSTLRL SGLLRRQFWR NEPPFTRIRL 
TFGGWLSLAL EFQLGADIVA TTTSPSTRSL LQLGAVALIR TFLNFFLARE MEMEQRLEQQ
TQGAQAESTH