| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1325 |
|---|
| Symbol | |
|---|
| ID | 3775518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1355787 |
|---|
| End bp | 1357151 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637799756 |
|---|
| Product | primary replicative DNA helicase |
|---|
| Protein accession | YP_400342 |
|---|
| Protein GI | 81300134 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAGG AACTTCGCTT CGACATCCTT CCCGATCGCC ATGAGCCGCC CCAAAACGTC
GAAGCTGAGG AAGCGATTCT CGGGAGTATC CTGCTCGATC CCGAGGCGAT CGGGCGGATT
GCCGATGTAC TCTCACCCGA AGCCTTTTAC AACTCCAACC ACCGCGACAT CTATCGCGCT
GCTGTCCAGC TGCATAGCCA AGGCCAGCCG ACCGATCTGA CCAGTCTGAC CACCTCCCTC
CAAGATGCCG GTCAGCTCGA CAAGGTCGGC GGTCAATCTC GGCTGGCGAA GCTGGTCGAT
CGCGTAGTGA CGACGGCTAA CGTCGAGCAA TACGCTCAGT TAGTCATCGA TAAGTTTCTG
CGGCGGCAAC TGATTCAAGC CGGTAATTCC GTCATTCAAC TGGGCTATGA CACGACTAAA
CCGCTAGAAG CAGTGCTCGA TCAGGCTGAA CAAAAAGTCT TTGGGATTAC TCAAGAACGC
CCAACCATGG GCTTGTTGCC AGCAGCCGAG ATTCTTACCA GCACCTTTGC AGAAATTGAG
AGCCGTTCCA TGGGAACTGC ACTCTCGGGT ATCTCCTGTA ATTACTACGA TCTGGATGCC
ATGACCCAAG GCTTTCAGCG ATCGGATTTG ATCATTGTTG CGGGTCGTCC CGCCATGGGT
AAAACCAGTA TCGTTCTCAA TATTGCTCGC AACATTACGG TTGCTCACAA ACTGCCTGTT
TGTGTGTTCA GTTTGGAGAT GTCAAAAGAG CAGCTGATCT ACCGCCTGTT GTCAATGGAG
ATTGGGATTG AGAGTAGCCG CCTGCGATCG GGCCGGATTG GCGATCACGA GTGGGAGATG
CTGGGTAAAG GCATTATGCA GCTTTCCCAA TTGCCTGTTT TTATTGATGA CACGCCGGGG
TTGACTGTCT CAGAAATGCG ATCGAAAGCT CGACGATTGA TGTCTGAGCA GGGTGGGCAA
CTGGGGCTCA TTTTGATTGA CTATTTGCAG CTGATGGAAG GTAGCTCCAG TGATAATCGG
GTTCAGGAAA TTTCTAAAAT TACGCGATCG CTCAAAGGTT TAGCTCGTGA ATTAAATGTA
CCCGTGATTG CCCTCTCACA GCTCAGTCGG GGTGTGGAAT CACGGACGAA CAAACGACCG
ATGATGTCCG ACTTGCGGGA AAGTGGCTCG ATTGAGCAAG ATGCTGATTT AGTAATGATG
ATTTATCGGG ATGAGTACTA CAATCCCGAT ACGCCCGATC GCGGGATCAC GGAAATTATT
GTCGCCAAAC ATCGGAATGG ACCAGTCGGA ACCGTCAAGC TGCTATTCGA GCCGCAATTT
ACGCGCTTTC GCAACTTAGC GGGCAGTCAT GCGCCTACGG GTTGA
|
|---|
| Protein sequence | MVQELRFDIL PDRHEPPQNV EAEEAILGSI LLDPEAIGRI ADVLSPEAFY NSNHRDIYRA
AVQLHSQGQP TDLTSLTTSL QDAGQLDKVG GQSRLAKLVD RVVTTANVEQ YAQLVIDKFL
RRQLIQAGNS VIQLGYDTTK PLEAVLDQAE QKVFGITQER PTMGLLPAAE ILTSTFAEIE
SRSMGTALSG ISCNYYDLDA MTQGFQRSDL IIVAGRPAMG KTSIVLNIAR NITVAHKLPV
CVFSLEMSKE QLIYRLLSME IGIESSRLRS GRIGDHEWEM LGKGIMQLSQ LPVFIDDTPG
LTVSEMRSKA RRLMSEQGGQ LGLILIDYLQ LMEGSSSDNR VQEISKITRS LKGLARELNV
PVIALSQLSR GVESRTNKRP MMSDLRESGS IEQDADLVMM IYRDEYYNPD TPDRGITEII
VAKHRNGPVG TVKLLFEPQF TRFRNLAGSH APTG
|
|---|
| |