Gene Synpcc7942_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1318 
Symbol 
ID3775511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1347917 
End bp1348768 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content57% 
IMG OID637799749 
Productmanganese transport system membrane protein MntB 
Protein accessionYP_400335 
Protein GI81300127 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTTG ACAGTCTGAC TGCACCGCTG ACCTACGACT TTTTTCGGCG GGCCTTACTG 
ATGGGCTTGA TCGCCGGCGT GATTGGGCCG GTGGTCGGGA GTTACTTGAT CGTGCAGCGC
CTTGGCTTTT TGGCGAATGT GATCTCCCAT GCGGTGCTGC CGGGCTTGGT GATTGCCCAA
GCGATCGGCC TCGACATTAG CATTGGCGCT TTCTTGTCAG GATTGCTCAG CTCGGGCCTG
CTGACTTGGA TTCAGAGTCA GGCTGTGGTT AAACCCGATG CGGCCATGAA TGCAATTTTG
GCGAGCTTTT TTGCCCTGGG AATGCTGCTA ATTCCCATCC TCGGTAGCCG CTTGAATCTG
GAAGGCTTTC TGTTTGGCGA CATCCTCAGC GTCAGTCCCA CGGATCTCTG GCGGAGTGGC
AGCATTGCCG TGGGAGTGTT GCTGGCGATC GCGCTTTGCT ATCGTCCTTT GCTCTACTAC
TCCTTTGATC CGGTGGGAGC AGCGGCGATC GGCTTGCCAG TACGCTGGCT GGAATTTGGC
TTAGTCACGG CGATGAGTTT GACGATCATT GCAGGCATGC AGGCGGTGGG CGTCATTTTG
ATCATTGCCC TGATTTCCTG CCCGGCGCTA GCAGCCTACC TTTTGGTGCG AGAGCTGCAC
TGGATGCTGG TGCTCAGCAG TGTGATCGGT GTCGCCTCTG CTTGGCTGGG GCTGTATGGC
AGCTACTATC TCAACCTGCC CTCGGGACCC GCGATCGCCC TGATCAGTTT CTTGGCATTT
CTGGCAGCCT TTCTGTTTAG TCCGAGTCGT GGCATCTGGG GGCGATCGCG CGCTAAATCC
AAACTGAGCT AA
 
Protein sequence
MIVDSLTAPL TYDFFRRALL MGLIAGVIGP VVGSYLIVQR LGFLANVISH AVLPGLVIAQ 
AIGLDISIGA FLSGLLSSGL LTWIQSQAVV KPDAAMNAIL ASFFALGMLL IPILGSRLNL
EGFLFGDILS VSPTDLWRSG SIAVGVLLAI ALCYRPLLYY SFDPVGAAAI GLPVRWLEFG
LVTAMSLTII AGMQAVGVIL IIALISCPAL AAYLLVRELH WMLVLSSVIG VASAWLGLYG
SYYLNLPSGP AIALISFLAF LAAFLFSPSR GIWGRSRAKS KLS