Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1316 |
Symbol | |
ID | 3775509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1346077 |
End bp | 1347114 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637799747 |
Product | Mn transporter MntC |
Protein accession | YP_400333 |
Protein GI | 81300125 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.832277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGATGA AGATTACGTT GGGTTCTGCT AAAGCACTGA GTCTGATCTG TGCGACAGCG CTGCTTTGGG GCTGTCAGCA GCCTGCTAGC CGCGATCGTA ATCAGCCCAA GGTGGTGGCC ACGACTGCCG TACTCTGCGA CCTCGCGCAG CAAATTGGCA GCGACAGCAT CGACCTCACC TGCTTGCTGC AACCTGATCA AGATCCCCAC GTCTACACCC CCACACCTGA GGACCGGCGC GCAGTGGAAG AAGCGCAGCT GGTGCTCTAC GGTGGCTACG ACTATGAGCC ATCCCTCATT CGCATTGTCC AGGCCACCCA GTCTGCGGCT CCCAAGCTGG CGGTCTACGA AGCTGCCGTG CCAACCCCTT TGTTGGGGGG AGCGCATGAC CATGACCACG GCGAGAAAGC AGGCGACGAT CACGGTCACG ATCATGCAGA AGAGAAGACA GCAGCAGCCA CTGCTGACGC CGATCAGACA CCGGATCCCC ACGTCTGGCA CGATGCCCGC AATGGCATTG CGATCGCCCA AGTGGTCACC CAAGCCCTGA GTGAGCTCCA GCCCGCTGAA GCCAGCACCT ATCAGCAACG GGAGCAAGCG ATCGTGGCGG AACTCCAGCA AATTCAAGCC TGGATTCCCC AGCAAATTGC CACGATTCCC GCCAATCAAC GGCGGCTGAT TACCACTCAC GATTCGTTTG GCTACTATGC CCGCGCCTAT GGGCTGACAG AATCAGGGGC GATCGCTGGC CTCAGCACCC AAGAGCAACC GACACCGACG CGCCTGACGG AATTGGTCAA TAGCCTGCGC GCTGCTCAAG TCCCGACTGT TTTCAGAGAG ACCACTAGCA ATCCCCAGTT GATTGGCACC GTCGCCCAGG AGGCCGGAGT ACAGGTCTCT GCGCAACCGC TCTACGTGGA AGGCCCGGGT GGCGCTGATT CCCCCGCCCC CAACTACCAG CAGATGCTGA TCCACAACAC CTGTGCGATC GCGACTGGCT TGGGCGGGCG TTGCCAACCG CCTCAGCGGC AGTCCTAG
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Protein sequence | MMMKITLGSA KALSLICATA LLWGCQQPAS RDRNQPKVVA TTAVLCDLAQ QIGSDSIDLT CLLQPDQDPH VYTPTPEDRR AVEEAQLVLY GGYDYEPSLI RIVQATQSAA PKLAVYEAAV PTPLLGGAHD HDHGEKAGDD HGHDHAEEKT AAATADADQT PDPHVWHDAR NGIAIAQVVT QALSELQPAE ASTYQQREQA IVAELQQIQA WIPQQIATIP ANQRRLITTH DSFGYYARAY GLTESGAIAG LSTQEQPTPT RLTELVNSLR AAQVPTVFRE TTSNPQLIGT VAQEAGVQVS AQPLYVEGPG GADSPAPNYQ QMLIHNTCAI ATGLGGRCQP PQRQS
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