| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1315 |
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| Symbol | |
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| ID | 3775508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1344583 |
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| End bp | 1345983 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799746 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_400332 |
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| Protein GI | 81300124 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCA TATCGCAACC CGTCATCGTC ATTGGAGCAG GGTTAGCGGG GACCGAAGCG
GCTTGGCAGA TTGCTGAAGC AGGTGTGCCG GTCATCCTCT ACGAGATGCG GCCCCAGCGA
CAAAGTCCGG CGCACCACAG CGAATCTTTT GCAGAGCTGG TCTGCAGCAA CTCTTTTGGA
GCGATGGCCA GCGATCGCGC GGCAGGTTTG CTGCACGAAG AATTGCGGCG TCTGGGATCC
TTAGTTTTCA GCAAAGCGAG CGAGCATCAA GTGCCGGCAG GCGGTGCGCT TGCAGTCGAT
CGCGCCTTAT TTAGCGAAGA TCTGACCCGC ACTGTGGCGG ATCATCCCTT GGTTGAGATT
CGGCGGGAAG AATTGCGATC GCTGCCAACC GAGGGCATTG TTGTCCTCTG CACCGGCCCG
CTCACCAGTC CCGATCTTGC AGAGGACCTG CAGCGGTTTA CGGGACAGGA CTATTGCAGC
TTCTTTGATG CGGCCAGCCC AATCGTCACG GGCGAGTCGA TTGATCAAGC GATCGCCTTC
CGAGCCTCGC GCTACGACAA AGGCGAAGCC GCTTATCTCA ACTGTCCCCT CAATCGCGAT
CAATATCTGG CTTTCCGCGA AGCTCTAGTC ACGGCAGAGC AAGCCGAACT CAAGGATTTT
GAACAGGAGT CAGCCAAATT CTTTGAAGGC TGCCTGCCGA TCGAAGAATT GGCGCGGCGC
GGTGAAGACA CCATGCGCTA CGGTCCGCTC AAACCCGTTG GCCTGTTTGA TGCCCGTCTC
GGCGATTGGC GCGATCCCGA AAATCGGAGT CGCCGTCCCT ACGCGATTGT CCAGCTGCGG
CAGGAAGATC GAGCCGGCAA CCTTTGGAAT TTAGTTGGGT TTCAGACCAA TTTGCGCTGG
GGCGAGCAAA AGCGCATCTT CCAGATGATT CCGGGGCTCA GCCAAGCAGA GTTTGTCCGG
TTTGGGGTCA TGCATCGCAA TACCTTTGTC AATGCGCCGC AACTGCTCGA TGCCAGTCTG
CAATTCCGGC AGCGACCGAC TCTCTTGGCT GCGGGGCAGT TGATTGGTAC AGAAGGCTAT
AGCGCGGCGG TGGCGGGCGG CTGGTTGGCC GGAACCAACG CGGCGCGCTT AGCCCTTGGG
CGATCGCCCC TAGTCTTACC CGACACGCTA GTCAGTGGCT CCCTGTTCCG CTTTATCAGT
AGCGCTGAGC CTAAGTATTT CCAGCCGATG CCGCCTAACT TCGGTATCCT ACCCAATCTG
GAGCAGCCCC CTCGCAACAA GAAAGATCGT TACGCCGCGT ACCGCGATCG CGCCCTTCAA
GATTTACGGG ACTGGCAGCA AACCCACGCG ATCGGCAATT TGTCGCCAAG TACAGGTTTA
GCTACAACGG CGATCGCGTA A
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| Protein sequence | MAAISQPVIV IGAGLAGTEA AWQIAEAGVP VILYEMRPQR QSPAHHSESF AELVCSNSFG
AMASDRAAGL LHEELRRLGS LVFSKASEHQ VPAGGALAVD RALFSEDLTR TVADHPLVEI
RREELRSLPT EGIVVLCTGP LTSPDLAEDL QRFTGQDYCS FFDAASPIVT GESIDQAIAF
RASRYDKGEA AYLNCPLNRD QYLAFREALV TAEQAELKDF EQESAKFFEG CLPIEELARR
GEDTMRYGPL KPVGLFDARL GDWRDPENRS RRPYAIVQLR QEDRAGNLWN LVGFQTNLRW
GEQKRIFQMI PGLSQAEFVR FGVMHRNTFV NAPQLLDASL QFRQRPTLLA AGQLIGTEGY
SAAVAGGWLA GTNAARLALG RSPLVLPDTL VSGSLFRFIS SAEPKYFQPM PPNFGILPNL
EQPPRNKKDR YAAYRDRALQ DLRDWQQTHA IGNLSPSTGL ATTAIA
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