| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1314 |
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| Symbol | |
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| ID | 3775507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1342534 |
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| End bp | 1344405 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799745 |
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| Product | FtsH-2 peptidase |
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| Protein accession | YP_400331 |
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| Protein GI | 81300123 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.997053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA AGGAGAATCC CACGCGGCCG AGCCGCAACC GTATTATCAG CTTCGTCCTG
TTTGGTGTGG GTCTGTTCTT TTTGCTGATT GGGTTAATTC CCGGCGTGGG CAGTCCCCAA
GTCTCTCGGG TGCCCTACAG CCTATTCATC GATCAGGTGA ATGATGGCTT GGTTGCCCGG
GCTTACATCA CGCAGGAACA AATTCGCTAC CAACTCAAGG ATGTTGAGGG CGAAGCGGGT
GATGTCCTCA GCACAACGCC CATCTTTGAC TTGGAACTCC CTCAGCGTCT GGAACAAAAG
GGGGTTGAGT TTGCTGCTGC CCCACCTCAG AAAGGAAATT TCTTTACCAC TCTGCTCGGT
TGGATCATTC CGCCCTTGAT TTTCATTGGG GTGCTGCAAT TCTTTGCAGC TCGGCAAGCC
CGCAATGGCC CGCAAGGCGC GCTGTCTTTC ACGAAGAGTC GCGCTAAGGT CTACGTCGAA
GGTGATGATA CCCGTACCAC CTTCAGTGAT GTGGCGGGCG TCGAAGAGGC GAAGGCCGAA
CTGCAAGAGA TTGTTGACTT CCTCAAAACC CCTGAACGCT ACCTCAACAT TGGCGCTCGT
ATTCCAAAAG GGGTATTGCT GGTCGGGCCT CCGGGTACCG GTAAAACCCT GCTGGCGAAA
GCCGTAGCCG GTGAAGCCCG CGTGCCGTTC TTCTCAATTT CTGGTTCGGA ATTCGTCGAA
CTCTTTGTTG GCGCTGGGGC AGCTCGCGTC CGTGACCTGT TTGAACAAGC CAAGCAGAAG
GCACCTTGTA TCGTCTTCAT CGATGAGTTG GATGCGATCG GGAAATCTCG TGCCAGCGGC
AATTTCATGG GTGGCAACGA TGAGCGGGAG CAAACCCTCA ACCAGTTGCT GACCGAAATG
GATGGGTTCT CGGCAGATGG CGCCACTGTC ATTGTCCTTG CAGCCACCAA CCGGCCAGAA
ACACTGGATC CGGCATTACT ACGTCCGGGT CGCTTCGATC GCCAAGTCCT AGTCGATCGC
CCTGATCTGG CGGGACGGAA GGCAATTTTG GACATTTATG GCCGCAAGGT CAAGCTGGAT
CCGGAAGTCG ATTTACAAGC GATCGCGGTA CGAACCTCAG GCTTTGCCGG TGCGGACCTT
GCCAACCTCA TCAATGAAGC TGCTCTACTG GCAGCGCGTA ACGGTCGCAC AGAAGTCGCG
CAAGCTGATC TGAATGAAGC GATCGAGCGG GTGGTCGCGG GTCTGGAGAA GAAGAGCCGC
GTCCTCAACG ACAACGAAAA ACGGATTGTT GCCTACCACG AAGTCGGCCA CGCGATCGTG
GGTGCCCTGA TGCCCGGTGG CAGCAAAGTG GCCAAGATTT CGATCGTGCC GCGCGGTATG
GCAGCTCTGG GTTACACCCT GCAACTGCCG ACGGAAGATC GCTTCTTGCT CAGTGCCGAG
GAACTCAAAG GCCAGATTGC CACGCTGCTA GGTGGGCGAT CGGCGGAAGA GATCATCTTT
GGCAGCATCA CCACCGGCGC TTCCAATGAC CTGCAGCGAG CCACAGACGT GGCGGAGCAG
ATGGTCACCA CCTACGGCAT GAGCCAAGTC TTGGGCCCGT TGGCCTTTGA TAAAGGCGGC
GGCAATAACT TCCTTGGCGG TGAGGGTATG AATCCTCGCC GGCGGGTCAG TGATGAGACG
GCGAAGGCGA TCGACGCAGA GGTCAAGCAA CTCGTGGATG ATGGTCACGA TCAAGCCCTG
GCAATTCTGA ATCGCAATCG CGATCTACTC GAGGAAATTG CTCAGCGCAT CTTGGATGTG
GAAGTGATTG AAGGCGACGA GCTGCAATCC CTCCTCCAAC GCGCTGAACT GCCCGAGTTG
CAGCCAGCCT AA
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| Protein sequence | MAIKENPTRP SRNRIISFVL FGVGLFFLLI GLIPGVGSPQ VSRVPYSLFI DQVNDGLVAR
AYITQEQIRY QLKDVEGEAG DVLSTTPIFD LELPQRLEQK GVEFAAAPPQ KGNFFTTLLG
WIIPPLIFIG VLQFFAARQA RNGPQGALSF TKSRAKVYVE GDDTRTTFSD VAGVEEAKAE
LQEIVDFLKT PERYLNIGAR IPKGVLLVGP PGTGKTLLAK AVAGEARVPF FSISGSEFVE
LFVGAGAARV RDLFEQAKQK APCIVFIDEL DAIGKSRASG NFMGGNDERE QTLNQLLTEM
DGFSADGATV IVLAATNRPE TLDPALLRPG RFDRQVLVDR PDLAGRKAIL DIYGRKVKLD
PEVDLQAIAV RTSGFAGADL ANLINEAALL AARNGRTEVA QADLNEAIER VVAGLEKKSR
VLNDNEKRIV AYHEVGHAIV GALMPGGSKV AKISIVPRGM AALGYTLQLP TEDRFLLSAE
ELKGQIATLL GGRSAEEIIF GSITTGASND LQRATDVAEQ MVTTYGMSQV LGPLAFDKGG
GNNFLGGEGM NPRRRVSDET AKAIDAEVKQ LVDDGHDQAL AILNRNRDLL EEIAQRILDV
EVIEGDELQS LLQRAELPEL QPA
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