| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1313 |
|---|
| Symbol | aspS |
|---|
| ID | 3775506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1340634 |
|---|
| End bp | 1342433 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637799744 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_400330 |
|---|
| Protein GI | 81300122 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACTC ACTACTGCGG CGAACTTCGT GCCGAGCAAG TTGGCACCTC CGTCACGCTC
TATGGCTGGG TCGATCGGCG TCGGGATCAT GGTGGCGTGA TCTTTGTCGA TCTGCGCGAT
CGCACAGGCA CGGTGCAAAT CGTTAGTGAT CCAGAACGGA CGCCGGAGTC TTACCACCAA
GCCGAAGGCC TGCGCAACGA GTATGTGGTA AAAATCACCG GACGGGTCAG CGGTCGGCCG
GCGGAATCCC TCAACCCGAA GCTGCCAACG GGCGAAGTAG AAATCTACGC TGATCGCATT
GAAATTCTGA ACGCAGTCCG CCGTCAGTTG CCCTTCCAAG TTTCCAGCGC CGATGAAGAG
ACGGTGCGGG AAGATTTGCG GCTGCGCTAC CGCTACTTGG ATCTGCGCCG CGATCGCATG
AACCGCAATC TGCAGCTGCG TCACCAAGTC GTCAAGGCGA TTCGCCGCTT CTTGGAAGAT
GAAGAACAAT TTATCGAGAT TGAAACACCC GTCCTGACCA AGTCGACGCC GGAAGGCGCA
CGGGATTACT TGGTGCCCTC GCGGGTCAAT CCGGGCGAAT GGTTTGCCCT GCCGCAATCA
CCGCAGCTGT TTAAGCAACT GCTGATGGTG TCGGGGTTCG ATCGCTACTA CCAAATTGCC
CGCTGCTTCC GCGATGAGGA TTTGCGCGCC GATCGTCAGC CGGAATTTAC CCAGCTCGAT
ATGGAAATGA GCTTCCTCTC CCAGGAAGAA ATCATCGACC TGAACGAGCG GCTGATTGCT
CACATCTTCA AAACAGTGAA GGGTATTGAG CTGCCGCGAC CCTTCCCGCG CTTGACCTAC
GCTGAGGCGA TGGATCGCTA CGGCAGCGAT CGCCCCGACA CGCGCTTTGG CCTAGAGCTG
GTGGATGTTT CCGATGTCGT TGCGGACATG GGCTTCAAGG TCTTCAGTGG CGCAGTCAAA
TCCGGCGGCA AGGTCAAAAT CCTGCCGATT CCCGATGGCA ACGATCGCAT TTCCAACGTG
CGGATCAAGC CCGGCGGCGA CATCTTCAAA GAAGCCACGG AAGCCGGTGC TGCCGGTCTG
GCCTACATTC GCGTCCGTGA AAACGGCGAG ATCGACACGA TTGGCGCGAT CAAAGACAAC
CTCAGTGATG AGCAGAAAGC TGAGATCCTC CGTCGCACTC AGGCACAACC CGGAACGCTG
TTGCTATTTG GAGCAGGGAG CACCGACATC GTCAACAAGT CCCTCGATCG CGTCCGCCAA
TTCTTGGGTA AAGAGTTGGG ATTGATCGAT CCCGAGGCAC TCAACTTGCT CTGGGTCGTG
GACTTCCCGA TGGTCGAGTG GAATGCCGAT GAGAAGCGCT ACGAAGCGCT ACACCACCCC
TTCACGGCCC CCAATCCTCA AGATCTAGAA GACCTGACAA CGGCGCGAGC CCAAGCCTAC
GACATCGTCC TCAATGGCTT GGAAATTGGC GGCGGTAGTC TGCGGATTTA CCAACGCGAC
ATTCAAGAAC GGGTGTTTGA AACGATCGGC CTGTCCCACG AGGAAGCCCA AGCTAAATTT
GGATTCCTAC TGGAAGCCTT CGACTTTGGT ACTCCACCCC ACGGCGGCAT CGCCTACGGT
CTCGATCGCC TTGTGATGTT GCTGACCGGC GAAGAATCGA TCCGTGATGC GATCGCCTTC
CCGAAAACGC AGCAAGCCCG CTGTCTGTTG ACCGAAGCGC CGGCTGATGT CAGCGATCGC
CAGCTCAAAG AACTCTACGT CGCCTCCACT TGGCAACCGC CGATCAAAGA ACGCGACTAA
|
|---|
| Protein sequence | MRTHYCGELR AEQVGTSVTL YGWVDRRRDH GGVIFVDLRD RTGTVQIVSD PERTPESYHQ
AEGLRNEYVV KITGRVSGRP AESLNPKLPT GEVEIYADRI EILNAVRRQL PFQVSSADEE
TVREDLRLRY RYLDLRRDRM NRNLQLRHQV VKAIRRFLED EEQFIEIETP VLTKSTPEGA
RDYLVPSRVN PGEWFALPQS PQLFKQLLMV SGFDRYYQIA RCFRDEDLRA DRQPEFTQLD
MEMSFLSQEE IIDLNERLIA HIFKTVKGIE LPRPFPRLTY AEAMDRYGSD RPDTRFGLEL
VDVSDVVADM GFKVFSGAVK SGGKVKILPI PDGNDRISNV RIKPGGDIFK EATEAGAAGL
AYIRVRENGE IDTIGAIKDN LSDEQKAEIL RRTQAQPGTL LLFGAGSTDI VNKSLDRVRQ
FLGKELGLID PEALNLLWVV DFPMVEWNAD EKRYEALHHP FTAPNPQDLE DLTTARAQAY
DIVLNGLEIG GGSLRIYQRD IQERVFETIG LSHEEAQAKF GFLLEAFDFG TPPHGGIAYG
LDRLVMLLTG EESIRDAIAF PKTQQARCLL TEAPADVSDR QLKELYVAST WQPPIKERD
|
|---|
| |