Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1309 |
Symbol | |
ID | 3775502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1336073 |
End bp | 1337005 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799740 |
Product | hypothetical protein |
Protein accession | YP_400326 |
Protein GI | 81300118 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.401481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC GTCGTTTTCG GGAAGCGGTC GCCGCCGGTG AGTTTTTAAT CACCGCTGAG GTAGCGCCGC CCAAAGGTGC CGATCCCAGC GGAATGTTGG CTCATGCCGA ATTGCTGCGA TCGCGGGTTC ATGCCATCAA CATTACCGAT GGCAGTCGGG CCGTCATGCG CATGTCTGCT TTGGCTGCCA CAGCGCTCCT GCGTCAACAG GGGATTGAAC CGATCTGCCA GTTTGCCTGC CGCGATCGCA ATCGTATTGC CCTGCAAGCG GATTTGTTGG GAGCACAAGC GCTGGGTCTG GACAACATTC TGGCGTTGAC TGGCGATCCG GTGAAGGCGG GTGACAGTCC CGAAGCCCGG GCAGTGTTTG AGCTAGAGTC TGTCCGCTTG CTGCAGCTCA TCCAAAAGCT GAACAGCGGA CTGGATATCC ACGAGAAATC CTTGCCCGAT GGCGCTAGTG ATCTGTTTGT GGGTGCAGCT GTCGATCCGC AACTGAAGAG CTGGTCCGGA CTAGAGCGCC GGTTCTGGCG CAAGGTAGAC GCTGGCGCGC AGTTCTTCCA GAGTCAGCTA ATTTGTGATT TCGATCGCCT CGATCGCTTC ATGGAGCAGA TTGCACGGCC TAGCGGTCGC CCAGTACTGG CCGGTATTTT TCTACTCAAG TCCGCTAAGA ATGCGGAGTT TATCAACCGC AATGTGCCAG GGGTGCAGAT TCCCCAGACG ATCATCGATC GCCTCGCAGC GGCAGCGGAT CCATTGGCGG AAGGGATTGC GATCGCGGCT GAACAGGTTC GTTGGGCGCA GCAACTCTGT CAAGGCGTGC ACTTAATGGC GGTGCGGCGA GAAGACTTGA TTCCAGCCAT TCTCGATCAG GCAGGCATTG CTCCGTTACA ACCCTCCAGC GATCGCCAAT CATCGACTTT GCTTATGTCG TAG
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Protein sequence | MNMRRFREAV AAGEFLITAE VAPPKGADPS GMLAHAELLR SRVHAINITD GSRAVMRMSA LAATALLRQQ GIEPICQFAC RDRNRIALQA DLLGAQALGL DNILALTGDP VKAGDSPEAR AVFELESVRL LQLIQKLNSG LDIHEKSLPD GASDLFVGAA VDPQLKSWSG LERRFWRKVD AGAQFFQSQL ICDFDRLDRF MEQIARPSGR PVLAGIFLLK SAKNAEFINR NVPGVQIPQT IIDRLAAAAD PLAEGIAIAA EQVRWAQQLC QGVHLMAVRR EDLIPAILDQ AGIAPLQPSS DRQSSTLLMS
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