Gene Synpcc7942_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1309 
Symbol 
ID3775502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1336073 
End bp1337005 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content57% 
IMG OID637799740 
Producthypothetical protein 
Protein accessionYP_400326 
Protein GI81300118 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.401481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC GTCGTTTTCG GGAAGCGGTC GCCGCCGGTG AGTTTTTAAT CACCGCTGAG 
GTAGCGCCGC CCAAAGGTGC CGATCCCAGC GGAATGTTGG CTCATGCCGA ATTGCTGCGA
TCGCGGGTTC ATGCCATCAA CATTACCGAT GGCAGTCGGG CCGTCATGCG CATGTCTGCT
TTGGCTGCCA CAGCGCTCCT GCGTCAACAG GGGATTGAAC CGATCTGCCA GTTTGCCTGC
CGCGATCGCA ATCGTATTGC CCTGCAAGCG GATTTGTTGG GAGCACAAGC GCTGGGTCTG
GACAACATTC TGGCGTTGAC TGGCGATCCG GTGAAGGCGG GTGACAGTCC CGAAGCCCGG
GCAGTGTTTG AGCTAGAGTC TGTCCGCTTG CTGCAGCTCA TCCAAAAGCT GAACAGCGGA
CTGGATATCC ACGAGAAATC CTTGCCCGAT GGCGCTAGTG ATCTGTTTGT GGGTGCAGCT
GTCGATCCGC AACTGAAGAG CTGGTCCGGA CTAGAGCGCC GGTTCTGGCG CAAGGTAGAC
GCTGGCGCGC AGTTCTTCCA GAGTCAGCTA ATTTGTGATT TCGATCGCCT CGATCGCTTC
ATGGAGCAGA TTGCACGGCC TAGCGGTCGC CCAGTACTGG CCGGTATTTT TCTACTCAAG
TCCGCTAAGA ATGCGGAGTT TATCAACCGC AATGTGCCAG GGGTGCAGAT TCCCCAGACG
ATCATCGATC GCCTCGCAGC GGCAGCGGAT CCATTGGCGG AAGGGATTGC GATCGCGGCT
GAACAGGTTC GTTGGGCGCA GCAACTCTGT CAAGGCGTGC ACTTAATGGC GGTGCGGCGA
GAAGACTTGA TTCCAGCCAT TCTCGATCAG GCAGGCATTG CTCCGTTACA ACCCTCCAGC
GATCGCCAAT CATCGACTTT GCTTATGTCG TAG
 
Protein sequence
MNMRRFREAV AAGEFLITAE VAPPKGADPS GMLAHAELLR SRVHAINITD GSRAVMRMSA 
LAATALLRQQ GIEPICQFAC RDRNRIALQA DLLGAQALGL DNILALTGDP VKAGDSPEAR
AVFELESVRL LQLIQKLNSG LDIHEKSLPD GASDLFVGAA VDPQLKSWSG LERRFWRKVD
AGAQFFQSQL ICDFDRLDRF MEQIARPSGR PVLAGIFLLK SAKNAEFINR NVPGVQIPQT
IIDRLAAAAD PLAEGIAIAA EQVRWAQQLC QGVHLMAVRR EDLIPAILDQ AGIAPLQPSS
DRQSSTLLMS