Gene Synpcc7942_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1306 
Symbol 
ID3775499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1333522 
End bp1334082 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID637799737 
Producthypothetical protein 
Protein accessionYP_400323 
Protein GI81300115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.289354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCC GTCCTTCCCC TCCTTCCTAC CCCAGCCGCT ACTCGGAGCC GCCGAGCCGC 
CCGCCTCAGC AGCCCCAGAA CAAAAATCCT TTCGACTTGA TGACCTTGTC GATTCTAGGT
GGTGTGCTGA TCATCGGAAT CGGGATTGGC TCGGTGATTA CGTCCAACCT AAGCTTCTCG
CCAGAGAACG TCGTTTCGCG GGAAGCCTTA GATCAGCAGG CTCCCGATCG CGATATCTGT
GTGCAGTACG GTGCCAGTGC TGTCGCGATG GACATGCGCG TCTTTATGAC CCTCAATCCG
TTTAGCGTCT ATGTGTCGCA GCCGGTGATG CAGCCGGGTT GTGTGATTCG GCGGAATAAC
TGGGCCGTGC TCGAGCAACA GGGAGCCGTC AGCGGAAACG ATGTGCGCGA CTGCAAAAAC
CGGATGAATA CCTTTGCCTA TACAGGGACG CTGCGCAGCA AACCGGCTGT GAATTGCGTC
TATCAAAACG ACGCTGCTCA GAACCTCTTC CTCTCGCCGG GTGGGGCCGA GCAATCGCCT
AACGAAAGCA ACCAGTTCTA A
 
Protein sequence
MRRRPSPPSY PSRYSEPPSR PPQQPQNKNP FDLMTLSILG GVLIIGIGIG SVITSNLSFS 
PENVVSREAL DQQAPDRDIC VQYGASAVAM DMRVFMTLNP FSVYVSQPVM QPGCVIRRNN
WAVLEQQGAV SGNDVRDCKN RMNTFAYTGT LRSKPAVNCV YQNDAAQNLF LSPGGAEQSP
NESNQF