| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1301 |
|---|
| Symbol | |
|---|
| ID | 3775937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1328678 |
|---|
| End bp | 1330141 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637799731 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_400318 |
|---|
| Protein GI | 81300110 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAGCG GGAATGCTGG AGACACTGCT TGTTTGCCGG CTATGGTTCA GGCCGCATCA
CTCACCGCGC AACAACTGCT TCAGCAGCAT TGGGGTTACC CCGCCTTTCG ACCGGGACAG
GCTGAGATTG TAGAGGCGAT CGCTCAAGGT CGAGATTGTC TGATCATCTG GCCAACCGGC
GGTGGCAAAT CGCTCTGCTT CCAAGTGCCA GCACTTCTGC GATCGGGGTT GACGATCGTG
GTGACGCCGC TGATTGCCCT GATTGAAAAT CAAGTGGCGG ACCTACAAGC ACGGGGAATT
GCTGCCGCCT GCCTCCATAG CCAGATGGCT CCACGCGATC GCAAGGCCGT GCTTCAGAAG
TTACCGCAAC TCAAGCTGCT CTATCTGGCG CCCGAAACCT TACTGAGTAC GCCTCTCTGG
TCGCGTCTGA CGGAGCCAAC GATTGCGATC GCAGGACTCA TCCTCGACGA AGCCCACTGT
CTGCTGCAGT GGGGCGAAAG TTTCCGACCG ACCTACCTGC GGCTAGGTGC GATCCGACCT
GCTCTCGTCC GATTGGGTAA ACCTTCCTTC CCGATCGCAG CTTTCACAGC GACCGCTTAC
CCCCAAGAGG TGGCACGACT CAGCCAGATA CTACAACTGC AACAACCTCA ACGACATCAG
CGCGATCCCT ATCGCAGCAA TCTTGTCCTA GCCGTGAAGA CGGTGTGGAC GCCTCGCCAG
CGTCAGAATC AGCTCTTAGA CTTTTTAGCC AAACATCAAG GTCAGAGTGG CTTAATCTAT
CTGCGCAGCC GGCGCGACTG TGAAACCTGG GCCGACCGCT TGCGCAATCG AGGCTACCGC
TGCGCGGCTT ATCATGCCGG AGTGAGCGAT CGCGAACGGC GGCAAATTGA GCAAGCTTGG
CAAACTGGTT CGCTGCCCTT TGCAGTCTGT AGCTCTGCCT TTGGGATGGG CATTGATAAG
CGCGATGTAC GCTGGGTTGC CCATGTACAC CCCCCTTTGC TCCTCAGTGA ATATCTGCAA
GAAGTCGGCC GTGGTGGACG TGATCAACAA CGGGCCCAAG GCCTGACCTT AGTGAGTGAG
CCCAGTGGTT GGCTCGATCC GAGCGATCGC GATCGCTGGC AAGGATTTCA GCAGGCTACC
CAGCAACAAT GGGAAGCGGC CCAACGGCAA GCCCAGCAAC TTCCCGCCAG TGGCGATCTT
CGCAGCCTAG CCAGTAGTAA TGAACTGGAT TTAGCCTTGG CCTACCTGCA AAGACTGGGG
CAGTTGCAGT GGCTGGATCC CTTCCGGTAT CGGCGGCGAG CCATACCCAC TCCACGCCCA
GCACCCCGGC TGGATCTACA ACCCCTGCGG CAGTTCCTCT ACAGTCGCGA CTGCCGTTGG
CGATCGCTGT TGCAATCCTT CGGGAGCAAT CACCCCACAA CTTGGCGCTG TGGACACTGC
GATCGCTGCC AAACCACTGG CTGA
|
|---|
| Protein sequence | MASGNAGDTA CLPAMVQAAS LTAQQLLQQH WGYPAFRPGQ AEIVEAIAQG RDCLIIWPTG
GGKSLCFQVP ALLRSGLTIV VTPLIALIEN QVADLQARGI AAACLHSQMA PRDRKAVLQK
LPQLKLLYLA PETLLSTPLW SRLTEPTIAI AGLILDEAHC LLQWGESFRP TYLRLGAIRP
ALVRLGKPSF PIAAFTATAY PQEVARLSQI LQLQQPQRHQ RDPYRSNLVL AVKTVWTPRQ
RQNQLLDFLA KHQGQSGLIY LRSRRDCETW ADRLRNRGYR CAAYHAGVSD RERRQIEQAW
QTGSLPFAVC SSAFGMGIDK RDVRWVAHVH PPLLLSEYLQ EVGRGGRDQQ RAQGLTLVSE
PSGWLDPSDR DRWQGFQQAT QQQWEAAQRQ AQQLPASGDL RSLASSNELD LALAYLQRLG
QLQWLDPFRY RRRAIPTPRP APRLDLQPLR QFLYSRDCRW RSLLQSFGSN HPTTWRCGHC
DRCQTTG
|
|---|
| |