Gene Synpcc7942_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1299 
Symbol 
ID3773588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1326892 
End bp1327854 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content54% 
IMG OID637799729 
Producthypothetical protein 
Protein accessionYP_400316 
Protein GI81300108 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.494642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCGA CAGTTGCCTT GCTGCGGGTC GATCGCTACG AAGCCCAATT GCTCGATGAG 
CGACTCGCGG CCTTACTTGC GCCTTGGGGG GGAATGGCTG CTTTCGTGAA GCCCGGCCAG
AAAGTCTTGC TCAAACCCAA TTTGTTGACA GGAAATCGGC CCGGTAAGGA GTGTGTGACG
CGTCCCGACC TCGTAGCAGC GATCGCGCGG CTAGTTCGCC AAGTCGGTGG AGAGCCATTT
TTGGGCGATA GTCCTGCTTT TGGGAGTGCC AAAGGGGTCG CGATCGCTAG TGGCTATGGC
CCAATGTTGG AGGAACTCGA TATTCCCCTA GTGGAATTTC GCGGTGTGCG ACAGAGTACT
GACAGTCCTA CTTTTCAGCA CCTCAGGCTT AGTCGGGAAG CTTTAGGGGC AGATGTCGTT
ATCAACATCC CCAAGCTCAA ATCCCATGTG CAGCTGACGC TCTCGGCAGG CGTGAAAAAT
CTGTTTGGTT GCGTCCCCGG CAAGATGAAA GCGTGGTGGC ACCTCGAAGC TGGGAAAGAT
CGCGATCGCT TTGGTGAAAT GCTTGTGGAA ACTGCTCGGG CGATCTCACC AGCACTGACG
ATTTTGGATG CGATCGTCGC CCATGAGGGC AATGGTCCCA GCAACGGCGA ACCGCGATCG
CTCAAGCTAT TAGCAGCAGC GGATGATGTT TTTGCCCTCG ATCAAGCCTG TGCAACATTG
CTAGGGCTAA ATGAGTTGGC CGTTCCGACC CTAGCAGCGG CAGCACGACT GCAATTACAG
CATCCAACAT TGCACTATCC CTTTCTAGAT GCTGGTGATT GTCGGATTCT GGATTGGCGG
CAACCCGACC GCCTAGTTCC CATTGATTTC GGTGCACCTA GAATTCTGCG ATCAACCCTG
AAGCATCTCT ACATCCGATT AATTAAAGAA CCGTTCCAAG CCTATGCACG GTCGTCTTCG
TAG
 
Protein sequence
MSPTVALLRV DRYEAQLLDE RLAALLAPWG GMAAFVKPGQ KVLLKPNLLT GNRPGKECVT 
RPDLVAAIAR LVRQVGGEPF LGDSPAFGSA KGVAIASGYG PMLEELDIPL VEFRGVRQST
DSPTFQHLRL SREALGADVV INIPKLKSHV QLTLSAGVKN LFGCVPGKMK AWWHLEAGKD
RDRFGEMLVE TARAISPALT ILDAIVAHEG NGPSNGEPRS LKLLAAADDV FALDQACATL
LGLNELAVPT LAAAARLQLQ HPTLHYPFLD AGDCRILDWR QPDRLVPIDF GAPRILRSTL
KHLYIRLIKE PFQAYARSSS