Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1299 |
Symbol | |
ID | 3773588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1326892 |
End bp | 1327854 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637799729 |
Product | hypothetical protein |
Protein accession | YP_400316 |
Protein GI | 81300108 |
COG category | [S] Function unknown |
COG ID | [COG2006] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.494642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCGA CAGTTGCCTT GCTGCGGGTC GATCGCTACG AAGCCCAATT GCTCGATGAG CGACTCGCGG CCTTACTTGC GCCTTGGGGG GGAATGGCTG CTTTCGTGAA GCCCGGCCAG AAAGTCTTGC TCAAACCCAA TTTGTTGACA GGAAATCGGC CCGGTAAGGA GTGTGTGACG CGTCCCGACC TCGTAGCAGC GATCGCGCGG CTAGTTCGCC AAGTCGGTGG AGAGCCATTT TTGGGCGATA GTCCTGCTTT TGGGAGTGCC AAAGGGGTCG CGATCGCTAG TGGCTATGGC CCAATGTTGG AGGAACTCGA TATTCCCCTA GTGGAATTTC GCGGTGTGCG ACAGAGTACT GACAGTCCTA CTTTTCAGCA CCTCAGGCTT AGTCGGGAAG CTTTAGGGGC AGATGTCGTT ATCAACATCC CCAAGCTCAA ATCCCATGTG CAGCTGACGC TCTCGGCAGG CGTGAAAAAT CTGTTTGGTT GCGTCCCCGG CAAGATGAAA GCGTGGTGGC ACCTCGAAGC TGGGAAAGAT CGCGATCGCT TTGGTGAAAT GCTTGTGGAA ACTGCTCGGG CGATCTCACC AGCACTGACG ATTTTGGATG CGATCGTCGC CCATGAGGGC AATGGTCCCA GCAACGGCGA ACCGCGATCG CTCAAGCTAT TAGCAGCAGC GGATGATGTT TTTGCCCTCG ATCAAGCCTG TGCAACATTG CTAGGGCTAA ATGAGTTGGC CGTTCCGACC CTAGCAGCGG CAGCACGACT GCAATTACAG CATCCAACAT TGCACTATCC CTTTCTAGAT GCTGGTGATT GTCGGATTCT GGATTGGCGG CAACCCGACC GCCTAGTTCC CATTGATTTC GGTGCACCTA GAATTCTGCG ATCAACCCTG AAGCATCTCT ACATCCGATT AATTAAAGAA CCGTTCCAAG CCTATGCACG GTCGTCTTCG TAG
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Protein sequence | MSPTVALLRV DRYEAQLLDE RLAALLAPWG GMAAFVKPGQ KVLLKPNLLT GNRPGKECVT RPDLVAAIAR LVRQVGGEPF LGDSPAFGSA KGVAIASGYG PMLEELDIPL VEFRGVRQST DSPTFQHLRL SREALGADVV INIPKLKSHV QLTLSAGVKN LFGCVPGKMK AWWHLEAGKD RDRFGEMLVE TARAISPALT ILDAIVAHEG NGPSNGEPRS LKLLAAADDV FALDQACATL LGLNELAVPT LAAAARLQLQ HPTLHYPFLD AGDCRILDWR QPDRLVPIDF GAPRILRSTL KHLYIRLIKE PFQAYARSSS
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