| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1298 |
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| Symbol | |
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| ID | 3773587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1325107 |
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| End bp | 1326837 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637799728 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_400315 |
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| Protein GI | 81300107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.135306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATG CCTTCAGTAC AGCAGACTCC TCAGATCAGT CACTACTGGA TGAGATAGAG
GTAGGACTAC CAAACCCAAA ACCGCGCCTA AAAGTCAAGG GGTGGCGTTC TTGGGTTTAT
GGTGGGGCAG GCTTACTCCT CGGTGTTTTT GGCATTGCAG GGAGCTTAGG ACTATTCGCA
ATTCAAGAAG CCCGTCGCCA AGTCGATCGC TCTCTTGAAG CGATCGAAGT TGCACAAATA
ATTGACTACT ACCAGATTCA ACTGCTCTTC CGATTTAACA GCTACCTGGA AAGTCGCCAA
GAAACCGATA ACAAACTCTA TCAGCTTGGA CAAGAACAGC TGTTGGATTC AATTGATAAG
TTAAAAAGCT TTTATGTTCA GCCCCCCAAT CCAGAACAGT TGAAAGAGAT TGCGGCGTTA
TCAGCGCTGA TCCAATCCAA GCTAGAGGAG CAGCAAAATC TAATGAATGC AAAGCAAGAG
GCTACACCAA GCCTCGATGC CTCTTATTAT AATGTACACT CTCAAATCAA TCAGATTGTT
CAAAATGAGC GAAGAATCCT CGATCGTCGT GTAATTAATG TTGATAGCTA TCGTCTACTC
ACAAATGTCC TCCTGATTTT AGGCTCGCTC CTAGGCTTGA CTCTTGCGAT CGCACTCTAT
CAAGAACAAC GCCGAGAGCA ACGGGAGATG AGTGTCATTG ATCATGATTA CCAAGAGAAA
GAAGATACGC TCAATCACAA GCTCAAAGTA TTGCAGCTCG AACAGAAATT AAGTAGTTTA
CTCCTGACCT GTCGCTCTAC AGAAGAGATT AAAAAAATTC TGGAGGATTT CTTTCAGCGC
TGGTTTCCTC AAGCACAAGG TGCTGTCCTT GAAATCAGTG CTTCGAGAGA TACACTCGTT
GAGATTGCTC GCTTTGGTGA GTTGGAATTA CCTTCTCTCG CGATGCCCTC CGATTGTTGG
GCAATGCGAC GAGGCGAATG TTATCACTCT AGTCAAGCGG AATTTACCTA TCCCTGCGGT
CTCTGTCACC ATCTACATGG AGAGATTATT CCTGATAATA TTATCTGTAT TCCATTACAA
GCACATGAAC AGCTGATTGG TATTTTACAC CTGACTAATG TTGACCCTAA GTCTCAAAAA
ATTGTGGAGT CTTTTGGTCA GCAATTAGCC TTACCTTTGG CAGTAATGCA CCTTCAAGAA
CAGCTCAAAC AGTTGAGCTA TCGAGATAGT AATACAGCTC TTTATAATCG GCGTTTCCTT
GATGAAATTC TTGAACGAAC GTTACTAACA GCAATTCGTC GTAATGAATC GCGGTCTCTA
GGGGATGCCC CTTATTCAGT GGGATTAATC TTCTTGGATG TTGATAAATT CAAAGACTTT
AATACGCGCT TTGGACATGC TGTTGGCGAT CAAGTGTTGC AGACACTCGG ACAAACGATG
CTGGAATCGT GTCGGCGCGG TGAAGATCTT GCTTGTCGGT ATGGGGGCGA GGAGTTCGTC
CTCATTTTGC CAGGCATGGA TGAGGACATG ACCTATCAAC GGGCTGAGCA AATTCGACTG
GCTGTGAGTC AGAAAGCAGT GAGCAATTGT CGGATCACGA TTTCTCTCGG CGTTGCAGCC
TTCCCTTCTG CTGGCCAAAC TCCCTCTGAG CTGTTGAAAG CTGCAAATAT GGCGATGCTC
AAAGCGAAGT TGAATGGTCG CAATCAGACG GTTCGGATTA GTCAGCTCTA G
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| Protein sequence | MQNAFSTADS SDQSLLDEIE VGLPNPKPRL KVKGWRSWVY GGAGLLLGVF GIAGSLGLFA
IQEARRQVDR SLEAIEVAQI IDYYQIQLLF RFNSYLESRQ ETDNKLYQLG QEQLLDSIDK
LKSFYVQPPN PEQLKEIAAL SALIQSKLEE QQNLMNAKQE ATPSLDASYY NVHSQINQIV
QNERRILDRR VINVDSYRLL TNVLLILGSL LGLTLAIALY QEQRREQREM SVIDHDYQEK
EDTLNHKLKV LQLEQKLSSL LLTCRSTEEI KKILEDFFQR WFPQAQGAVL EISASRDTLV
EIARFGELEL PSLAMPSDCW AMRRGECYHS SQAEFTYPCG LCHHLHGEII PDNIICIPLQ
AHEQLIGILH LTNVDPKSQK IVESFGQQLA LPLAVMHLQE QLKQLSYRDS NTALYNRRFL
DEILERTLLT AIRRNESRSL GDAPYSVGLI FLDVDKFKDF NTRFGHAVGD QVLQTLGQTM
LESCRRGEDL ACRYGGEEFV LILPGMDEDM TYQRAEQIRL AVSQKAVSNC RITISLGVAA
FPSAGQTPSE LLKAANMAML KAKLNGRNQT VRISQL
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