Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1292 |
Symbol | dnaG |
ID | 3773581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1313939 |
End bp | 1316023 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799722 |
Product | DNA primase |
Protein accession | YP_400309 |
Protein GI | 81300101 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.320597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATACTC CTCGGCTTCA TCCCGAAACG ATCGCAGCAG TCAAAGAACG GGCCGATATC GTCGATATCG TCTCGGAACA AGTCGTGCTG AAAAAGCGCG GCAAGGATTT TGTCGGCCTC TGCCCGTTCC ACGACGATAA ATCGCCGAGC TTCACTGTCA GTCCGGCTAA GCAGTTCTAC TACTGCTTTA GTTGCGGCGC CGGCGGCAAT CCGATCAAGT TCCTGATGGA GCTAGGCAAG CAGTCCTTTA GCGAAGTTGT CCTCGATCTC GCGAAGCGCT ACCAAGTTCC GGTTCGTACC CTCGAAGTTC AGCAACATCA AGAGCTGCAA CGCCAGCTCA GCCGCCGCGA ACGCCTCTAC GAAGTTCTAG CTGTCGCGAC CCAGTTTTAC GAGCAGTCGC TGCGCCGACC AGAAGGTGCG GCAGCCTTGG ATTACCTCAG GCGATCGCGG CAACTCCAAG AGTCCACCAT TCAGAAATTT CAGCTCGGCT ATGCGCCAGC CCAGTGGGCC AGTCTGGCAA CCCATTTGAT TGAGCAGAAG CGCTTTCCTG CTGACTTGGT CGAAGAAGCC GGTTTAGTCG TGGCGCGGCG CAATGGCCAG GGCTACTACG ATCGCTTCCG CGATCGCCTG ATGATTCCCA TCCATGACCT GCAGGGGCGG GTCGTGGGCT TCGGTGGCCG CACGCTGACC GGTGAAGAGC CGAAGTATCT CAACTCGCCC GAGACCACGC TCTTTGAGAA GGGCAAGCTA CTCTTCGGGT TGGACAAAGC CCGCGCTGCG ATCGCCAAGC AGGATCAAGC TGTCGTCGTT GAAGGCTACT TCGATGTGAT CGCCCTGCAT GCAGCAGGCA TCGATCATGC GGTGGCTTCC CTCGGAACGG CCCTCAGTCG CCAGCAGGTC AAGCTGCTCT CGCGCTACAG CGAATCCAAT CAGATCGTGC TCAATTTCGA CGCCGATCGC GCTGGTGCTA AGGCGGCAGA ACGGGCGATC GGGGAAGTTG AAGATCTGGC CTATCAAGGA CAGGTACAGC TGCGGGTCCT CAATCTGCCT GGCGGTAAGG ATGCTGACGA ATACCTACAG CGTCACAGTG TCGCCGACTA TCGTGAGCTA CTGGCGCGAT CGCCCCTCTG GTTAGATTGG CAGATCGATC AACTGCTGCG CGATCGCAAC CTCGATCAGG CCGATCAGTT TCAAGCCGTC GTTCAAGCGA TCGTGCAACT GCTGGGCAAG CTGCCCAACA CACCTCTACG CACCCACTAC GTTCACCAAG TCGCCGAGCG CCTCAGTCAG GGTGAAGCCC GAACTGCTGT TCAGCTTGCC TCAGACCTGC GGGCACAAGT GCGGGGTCAA CGTTGGCATG GTCAGGCTAG CCGCTGGGAG AAACCGGGCG ATGTCAGCAT TCGGGAGCAA GCGGAAGCGC AGATTCTCAA GGTCTATCTC CATTGCCCAC GCTTGCGCTT GGCTGTCCGC AAAACCCTCC ACGATCGCGA AATTCAAGGT TTTAGCCTGC AGCCCCACCG TTTGCTCTGG CAGGCGATTG CTGAAATAGA AGAAGCGCAC CTTGGCTTTG CAGCCATGTA TCAAGTCGAG CGAGGGGAAG GCAACGGTGA CGACTTAGCA GCGATCGACC TCGTGCCGAT TCTGCGCGAT CGCCTCGATC AACTCACAGG AGTTTCCCTC GGTGGCTTCT TGGAACTGAG TGAAAATGAC CACGCCGATC TCACCCATCC ACTGCCGTTG TTACGGGGTG CTGTGGCCTT GGTGGAACGA CTGCGCTGCG AAAAACGTTG CCGCCATTTG CTTGACTCTT GGGCACGCCA GAGTATTCAC ACCTTTGAAC ATTGCATTGA GCAACTGCTG CAAGCAGGCA TTGGGGAGGA TGTTGATGCT GAGGCGCAGA TTACCGCTCT GCACGAACAG CTCAACCAAG AGGCGCTTCA CTTCCAAAAG CTTTACTACA ACGAGCGCCG CTATCTACAG CAACTCGATC AAGAACGCTG CCTGAATCCC CAAGCATTCT TGGGCATGAC AGAGCACGAT GCTACTGCGA TCGCCCCGAC CACTCCCCAG CCGATTTCTG CCTAA
|
Protein sequence | MDTPRLHPET IAAVKERADI VDIVSEQVVL KKRGKDFVGL CPFHDDKSPS FTVSPAKQFY YCFSCGAGGN PIKFLMELGK QSFSEVVLDL AKRYQVPVRT LEVQQHQELQ RQLSRRERLY EVLAVATQFY EQSLRRPEGA AALDYLRRSR QLQESTIQKF QLGYAPAQWA SLATHLIEQK RFPADLVEEA GLVVARRNGQ GYYDRFRDRL MIPIHDLQGR VVGFGGRTLT GEEPKYLNSP ETTLFEKGKL LFGLDKARAA IAKQDQAVVV EGYFDVIALH AAGIDHAVAS LGTALSRQQV KLLSRYSESN QIVLNFDADR AGAKAAERAI GEVEDLAYQG QVQLRVLNLP GGKDADEYLQ RHSVADYREL LARSPLWLDW QIDQLLRDRN LDQADQFQAV VQAIVQLLGK LPNTPLRTHY VHQVAERLSQ GEARTAVQLA SDLRAQVRGQ RWHGQASRWE KPGDVSIREQ AEAQILKVYL HCPRLRLAVR KTLHDREIQG FSLQPHRLLW QAIAEIEEAH LGFAAMYQVE RGEGNGDDLA AIDLVPILRD RLDQLTGVSL GGFLELSEND HADLTHPLPL LRGAVALVER LRCEKRCRHL LDSWARQSIH TFEHCIEQLL QAGIGEDVDA EAQITALHEQ LNQEALHFQK LYYNERRYLQ QLDQERCLNP QAFLGMTEHD ATAIAPTTPQ PISA
|
| |