Gene Synpcc7942_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1292 
SymboldnaG 
ID3773581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1313939 
End bp1316023 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content57% 
IMG OID637799722 
ProductDNA primase 
Protein accessionYP_400309 
Protein GI81300101 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.320597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACTC CTCGGCTTCA TCCCGAAACG ATCGCAGCAG TCAAAGAACG GGCCGATATC 
GTCGATATCG TCTCGGAACA AGTCGTGCTG AAAAAGCGCG GCAAGGATTT TGTCGGCCTC
TGCCCGTTCC ACGACGATAA ATCGCCGAGC TTCACTGTCA GTCCGGCTAA GCAGTTCTAC
TACTGCTTTA GTTGCGGCGC CGGCGGCAAT CCGATCAAGT TCCTGATGGA GCTAGGCAAG
CAGTCCTTTA GCGAAGTTGT CCTCGATCTC GCGAAGCGCT ACCAAGTTCC GGTTCGTACC
CTCGAAGTTC AGCAACATCA AGAGCTGCAA CGCCAGCTCA GCCGCCGCGA ACGCCTCTAC
GAAGTTCTAG CTGTCGCGAC CCAGTTTTAC GAGCAGTCGC TGCGCCGACC AGAAGGTGCG
GCAGCCTTGG ATTACCTCAG GCGATCGCGG CAACTCCAAG AGTCCACCAT TCAGAAATTT
CAGCTCGGCT ATGCGCCAGC CCAGTGGGCC AGTCTGGCAA CCCATTTGAT TGAGCAGAAG
CGCTTTCCTG CTGACTTGGT CGAAGAAGCC GGTTTAGTCG TGGCGCGGCG CAATGGCCAG
GGCTACTACG ATCGCTTCCG CGATCGCCTG ATGATTCCCA TCCATGACCT GCAGGGGCGG
GTCGTGGGCT TCGGTGGCCG CACGCTGACC GGTGAAGAGC CGAAGTATCT CAACTCGCCC
GAGACCACGC TCTTTGAGAA GGGCAAGCTA CTCTTCGGGT TGGACAAAGC CCGCGCTGCG
ATCGCCAAGC AGGATCAAGC TGTCGTCGTT GAAGGCTACT TCGATGTGAT CGCCCTGCAT
GCAGCAGGCA TCGATCATGC GGTGGCTTCC CTCGGAACGG CCCTCAGTCG CCAGCAGGTC
AAGCTGCTCT CGCGCTACAG CGAATCCAAT CAGATCGTGC TCAATTTCGA CGCCGATCGC
GCTGGTGCTA AGGCGGCAGA ACGGGCGATC GGGGAAGTTG AAGATCTGGC CTATCAAGGA
CAGGTACAGC TGCGGGTCCT CAATCTGCCT GGCGGTAAGG ATGCTGACGA ATACCTACAG
CGTCACAGTG TCGCCGACTA TCGTGAGCTA CTGGCGCGAT CGCCCCTCTG GTTAGATTGG
CAGATCGATC AACTGCTGCG CGATCGCAAC CTCGATCAGG CCGATCAGTT TCAAGCCGTC
GTTCAAGCGA TCGTGCAACT GCTGGGCAAG CTGCCCAACA CACCTCTACG CACCCACTAC
GTTCACCAAG TCGCCGAGCG CCTCAGTCAG GGTGAAGCCC GAACTGCTGT TCAGCTTGCC
TCAGACCTGC GGGCACAAGT GCGGGGTCAA CGTTGGCATG GTCAGGCTAG CCGCTGGGAG
AAACCGGGCG ATGTCAGCAT TCGGGAGCAA GCGGAAGCGC AGATTCTCAA GGTCTATCTC
CATTGCCCAC GCTTGCGCTT GGCTGTCCGC AAAACCCTCC ACGATCGCGA AATTCAAGGT
TTTAGCCTGC AGCCCCACCG TTTGCTCTGG CAGGCGATTG CTGAAATAGA AGAAGCGCAC
CTTGGCTTTG CAGCCATGTA TCAAGTCGAG CGAGGGGAAG GCAACGGTGA CGACTTAGCA
GCGATCGACC TCGTGCCGAT TCTGCGCGAT CGCCTCGATC AACTCACAGG AGTTTCCCTC
GGTGGCTTCT TGGAACTGAG TGAAAATGAC CACGCCGATC TCACCCATCC ACTGCCGTTG
TTACGGGGTG CTGTGGCCTT GGTGGAACGA CTGCGCTGCG AAAAACGTTG CCGCCATTTG
CTTGACTCTT GGGCACGCCA GAGTATTCAC ACCTTTGAAC ATTGCATTGA GCAACTGCTG
CAAGCAGGCA TTGGGGAGGA TGTTGATGCT GAGGCGCAGA TTACCGCTCT GCACGAACAG
CTCAACCAAG AGGCGCTTCA CTTCCAAAAG CTTTACTACA ACGAGCGCCG CTATCTACAG
CAACTCGATC AAGAACGCTG CCTGAATCCC CAAGCATTCT TGGGCATGAC AGAGCACGAT
GCTACTGCGA TCGCCCCGAC CACTCCCCAG CCGATTTCTG CCTAA
 
Protein sequence
MDTPRLHPET IAAVKERADI VDIVSEQVVL KKRGKDFVGL CPFHDDKSPS FTVSPAKQFY 
YCFSCGAGGN PIKFLMELGK QSFSEVVLDL AKRYQVPVRT LEVQQHQELQ RQLSRRERLY
EVLAVATQFY EQSLRRPEGA AALDYLRRSR QLQESTIQKF QLGYAPAQWA SLATHLIEQK
RFPADLVEEA GLVVARRNGQ GYYDRFRDRL MIPIHDLQGR VVGFGGRTLT GEEPKYLNSP
ETTLFEKGKL LFGLDKARAA IAKQDQAVVV EGYFDVIALH AAGIDHAVAS LGTALSRQQV
KLLSRYSESN QIVLNFDADR AGAKAAERAI GEVEDLAYQG QVQLRVLNLP GGKDADEYLQ
RHSVADYREL LARSPLWLDW QIDQLLRDRN LDQADQFQAV VQAIVQLLGK LPNTPLRTHY
VHQVAERLSQ GEARTAVQLA SDLRAQVRGQ RWHGQASRWE KPGDVSIREQ AEAQILKVYL
HCPRLRLAVR KTLHDREIQG FSLQPHRLLW QAIAEIEEAH LGFAAMYQVE RGEGNGDDLA
AIDLVPILRD RLDQLTGVSL GGFLELSEND HADLTHPLPL LRGAVALVER LRCEKRCRHL
LDSWARQSIH TFEHCIEQLL QAGIGEDVDA EAQITALHEQ LNQEALHFQK LYYNERRYLQ
QLDQERCLNP QAFLGMTEHD ATAIAPTTPQ PISA