| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1273 |
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| Symbol | |
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| ID | 3773562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1296812 |
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| End bp | 1298347 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799703 |
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| Product | hypothetical protein |
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| Protein accession | YP_400290 |
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| Protein GI | 81300082 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.485715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAC TGTCTTTGGC CGATCGCGTG GTGGTGACTG CGGAGCAGAT GCAGGCGATC
GAATCGCGTT TGTTTGCTGC TGGCATGCCC GTCGCCGCAC TGATGGAGAA AGTCGCGGGT
CTGCTCAGTC AACGCTTGCA GATGGCATAC CCCGATCGCA CCCAACGCTG GGGCATTTGG
GTGGGGCCAG GGCACAACGG CGGTGATGCG TTAGTAGTTG CGCGGGAATT ACACCTGCAG
GGCTATCCAG TGCAAATCTG GCATCCGTTT GAGCGCCGCA AGCCTCTGAC CGAGGCACAT
CTGCAATTTG CCCAGCACCT CGGGATTTCG ATCGCCTGCG ACTATCCCGA GCATTGCGAT
CGCTGGCTGG ACGGGGGCTT TGGTTTTGGG CTGAATCGCC CGTTGAATGA AGCAACACAA
ACCGCGATCG CCCAGCTCAA TGACAGTGGC AAACCAATCC TCAGCATCGA CCTGCCCTCT
GGCTTAGATA CTGATTCTGG CGAGCCGCTC GGCGCAGCAA TTCGAGCGGA ACGAACGTAT
TGCTTAGGGC TTTGGAAGCA AGGATTACTT CAGCTGGTGG CAGCTCCTTG GCATGGTGAG
TTGGAGCGGG TTGATTTCGG CATTGCTGAA GCAGATATTG TTGCCGTTTT GGGAGCAGTC
CCCGATCGCC AGATCCTGAC CGATGAAGCG GCGATCGCGG CTTTACCGCT CCCGATCGCG
GCGGATGCTC ACAAGTATCG GCGCGGCCAG CTACTGTTAA TCGCGGGTTC CCAGCGCTAT
CGGGGTGCGG CGCTATTAGC GGCTTTGGCG GCCCGATCGA GTGGCGTCGG GATGATGACC
CTAGCGGTGC CTGCCAGTCT GAGTGCGATC GCGATCGCTC AAGTTCCAGA AGCTCTCGTC
GTCGCTTGTC CAGAAACTGA GACTGGCGAG ATAGCTGAGC TGCCCATCGA CTGCGATCGT
TACAACGCCA TTGCGATCGG ACCAGGGGTT GGGACTGGGC CAACAATTCG CACCATCCTG
CACAGGGTTT TGCAGCAATC AACACCGTTC TTGATCGATG CTGATGCGCT GACCGTCTTG
GCTCAGCATC CTGAGGATTG GGCTTTACGA CCGGCGGAGG CTAGGACTGT GATCACACCC
CATGCGGGCG AATTTCAACG GCTATTTGGG TCTGCCCCCA CTCCCGCAAG CCTCTCTTCA
GCCGCATCTG AGCGATCGCT CATTCTGGTG CGCAAAGGGC CTTCTCCAAC GGTGGTGACG
CCCGTTGGCG CGAGTTGGGC CTTAGTGGAC AGTACACCTG CCTTAGCCCG AGGCGGCAGC
GGCGATGTCC TGACCGGATT GCTGGGTGGA CTCTTGGCGC AAACAGATGC CGTCTCCGCC
GCGATCGCCG CGACTTGGTG GCATAGCCGA ACCGCTCAGG CGATCGCGCA GAAGCAGACA
GCCTTGGGCG TCACACCCAC GGAACTTGCT GCCCAATTGA CACCTTGGCT GGGGCAACGG
CTGCAGTCGG AAATAGCACA GTATCTAGCA AGTTAA
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| Protein sequence | MAALSLADRV VVTAEQMQAI ESRLFAAGMP VAALMEKVAG LLSQRLQMAY PDRTQRWGIW
VGPGHNGGDA LVVARELHLQ GYPVQIWHPF ERRKPLTEAH LQFAQHLGIS IACDYPEHCD
RWLDGGFGFG LNRPLNEATQ TAIAQLNDSG KPILSIDLPS GLDTDSGEPL GAAIRAERTY
CLGLWKQGLL QLVAAPWHGE LERVDFGIAE ADIVAVLGAV PDRQILTDEA AIAALPLPIA
ADAHKYRRGQ LLLIAGSQRY RGAALLAALA ARSSGVGMMT LAVPASLSAI AIAQVPEALV
VACPETETGE IAELPIDCDR YNAIAIGPGV GTGPTIRTIL HRVLQQSTPF LIDADALTVL
AQHPEDWALR PAEARTVITP HAGEFQRLFG SAPTPASLSS AASERSLILV RKGPSPTVVT
PVGASWALVD STPALARGGS GDVLTGLLGG LLAQTDAVSA AIAATWWHSR TAQAIAQKQT
ALGVTPTELA AQLTPWLGQR LQSEIAQYLA S
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