| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1264 |
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| Symbol | |
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| ID | 3773553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1287939 |
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| End bp | 1289582 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799694 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_400281 |
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| Protein GI | 81300073 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.380967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGCACA CTAGAGGGCG ATCGCTACCC CTCCTGCCCG TGCTGCCTTT TCTGCTCGCT
GATCTCTCTC TGGCTGCGGT CACTGCCAAG CCAGAACCCA GCGCCGACCT GGCCACCACC
CTGACGATTT GTCTGCTGGG GGCCACGCTT GTGGCCTTGA TTTCGCGGCG CTTTCGCATT
CCCTACGTCA CCGGTCTGGT GTTGGCGGGA TTGACGATTA CCAACCTCTT GCCGCGTCGC
CTAGGGATTG ATTCAGGCTT AATTCTCAAT CTGTTTCTGC CCATTTTGGT CTTCCAAGCC
GCCATCAACA CCGACATCAG TCGGCTGCGC AGCTCATTTG CTCCGATCAG TGTCTTGGCG
GGGCCGGGCA TTCTGCTAGC CACGGGGGTC ACGGCCAGTG TGCTGAAATT TGGCCTGAAT
CTTGACTGGA TACCAGCGCT CTTAGTGGGC AGCATTCTGG CGATTACCGA CACGGTTTCG
GTGATTGCCG TCTTCCGGGA GATTGCCGTG CCCTCACGCC TGACCACGAT TGTGGAAGGG
GAAAGTCTGT TCAACGATGG GGTAGCCCTC GTGATTTTTG GCCTGATCGT CGAACTGCAG
GCCGGTGAGC AGGTGACAGC AATCAGTGCA GTGCAGTCCT TTTTTCTGGT GGTTTTGGGG
GGAGGACTGC TGGGACTGGC GACGGGCTAC TTGGCCTCGG GCTTGTTTCG CACCCTTGCC
GATGACTCCC TCAGTGGCAT TCTGCTGACT GTCGCCGTGG CCTTTGGCAC CTTTCAGCTA
GGGGAAGCGC TGAATGTCTC CGGCGTTGTT GCGGTGGTGG TGGCAGGATT GACGGTGGGG
AATCTCGCCC TTGATCGCGC CCAATCCCCC TCAAGTCGGC TGACGCTGAT CAACTTTTGG
GAGTACGCAG CCTTCTGCGT CAACACTTTC ATCTTTCTGT TCATCGGTGT AGAAGTCGAT
CCGCGATCGC TGCTGCAAAC GCTGCCGGCT GTCCTGCTGG CGATCGTGGC CTACCAGCTT
GCTCGCCTCG TCACGGTCTA TCCCCTGATG GCGCTGGTCA ACCGTTTCGA TCGCCCCATC
CCCTTCCGCT GGCAGCATGT GTTGTTTTTG GGCAATATCA AGGGTTCGCT CTCGATGGTT
CTGGCGCTGA GTTTGCCCGC TACCCTCGGG AACCGCAGTG AACTAGTCAA CCTCGTATTT
GGGGTGGTGT TGCTGTCTCT GGTGGTGCAG GGGTTGAGCT TGCCCTGGTT TGTCAAACGC
TTGAAGGTGG CGACCCGCTC GACGCGATCG CAGGAAGCAG AACAACTGCA AGCGCAGCTG
ATTGCCGGTA AAGCGGTGCA ATCGGAATTG CTGAACCTCT ACGATGCAGG GGTCTTGCCC
AAGGCAGTCC ATGAAGAACT ACGGGCGCGC TACCAACTGG CGATCGCAGG AGCAGAGCAA
TCGCTGCGCG GCCTCTACAA CCGGCGATCG ACCAATCTCC GCAACAGCGC AGCTCCCGCT
TTTTCGAGCC TGCAGCGTCG CTTACTGCTG GTGGAAAAAA ATGCCCTACT CGATTCGGCG
CGCAAAGGCA TTCTGACCGA GGAAGCGATC GCCGATCGCC TGCAGGTTAT TGATGCAGAA
CTCCTGCGGG CTGAAGCGGA CTAA
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| Protein sequence | MSHTRGRSLP LLPVLPFLLA DLSLAAVTAK PEPSADLATT LTICLLGATL VALISRRFRI
PYVTGLVLAG LTITNLLPRR LGIDSGLILN LFLPILVFQA AINTDISRLR SSFAPISVLA
GPGILLATGV TASVLKFGLN LDWIPALLVG SILAITDTVS VIAVFREIAV PSRLTTIVEG
ESLFNDGVAL VIFGLIVELQ AGEQVTAISA VQSFFLVVLG GGLLGLATGY LASGLFRTLA
DDSLSGILLT VAVAFGTFQL GEALNVSGVV AVVVAGLTVG NLALDRAQSP SSRLTLINFW
EYAAFCVNTF IFLFIGVEVD PRSLLQTLPA VLLAIVAYQL ARLVTVYPLM ALVNRFDRPI
PFRWQHVLFL GNIKGSLSMV LALSLPATLG NRSELVNLVF GVVLLSLVVQ GLSLPWFVKR
LKVATRSTRS QEAEQLQAQL IAGKAVQSEL LNLYDAGVLP KAVHEELRAR YQLAIAGAEQ
SLRGLYNRRS TNLRNSAAPA FSSLQRRLLL VEKNALLDSA RKGILTEEAI ADRLQVIDAE
LLRAEAD
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