Gene Synpcc7942_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1234 
Symbol 
ID3773522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1254739 
End bp1255242 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content55% 
IMG OID637799663 
Producthypothetical protein 
Protein accessionYP_400251 
Protein GI81300043 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0259963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGT TTCAGCGTTG GGGCTTTGAC TGGAAGCATT GGTATCGGGG CGATCGCGGT 
GAGTATTGGC TTCTGGCGCA ACTCGTCTTG TTGGTGGCCC TCGTTTTGGT TCCCCGCTGG
GCCATCCCGA TCGCAGCAGA TTGGATTGTT TGGCGATGGG CGATCGCAAT TCCCTTCCTG
ATCATGGGAG CTGGACTGGC GATTGCCGGT CTGCGCTTTT TGGGAGATAG CCTCTCGCCG
CTTCCGGCAC CCCATGCAGA ATCAACCCTG GTGCAAACTG GGATCTATGC TTGGATTCGT
CATCCGCTCT ACAGCGGCTT GATGATAGGC AGTCTTGGTT GGGCGATCGC GCTTTGGAGT
CTTAGTCAGG CAGCAGTCAG CCTCGCCTTA ATTGGGGTTC TGATTGGGAA GGCGCGGCTA
GAAGAACGAT GGTTGCGCGA TCGTTATTCC GACTACGTCG ACTACCAAAC TCGCGTTAAA
GCTTTTATTC CGGGCCTGAT TTAG
 
Protein sequence
MALFQRWGFD WKHWYRGDRG EYWLLAQLVL LVALVLVPRW AIPIAADWIV WRWAIAIPFL 
IMGAGLAIAG LRFLGDSLSP LPAPHAESTL VQTGIYAWIR HPLYSGLMIG SLGWAIALWS
LSQAAVSLAL IGVLIGKARL EERWLRDRYS DYVDYQTRVK AFIPGLI