Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1234 |
Symbol | |
ID | 3773522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1254739 |
End bp | 1255242 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799663 |
Product | hypothetical protein |
Protein accession | YP_400251 |
Protein GI | 81300043 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0259963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTGT TTCAGCGTTG GGGCTTTGAC TGGAAGCATT GGTATCGGGG CGATCGCGGT GAGTATTGGC TTCTGGCGCA ACTCGTCTTG TTGGTGGCCC TCGTTTTGGT TCCCCGCTGG GCCATCCCGA TCGCAGCAGA TTGGATTGTT TGGCGATGGG CGATCGCAAT TCCCTTCCTG ATCATGGGAG CTGGACTGGC GATTGCCGGT CTGCGCTTTT TGGGAGATAG CCTCTCGCCG CTTCCGGCAC CCCATGCAGA ATCAACCCTG GTGCAAACTG GGATCTATGC TTGGATTCGT CATCCGCTCT ACAGCGGCTT GATGATAGGC AGTCTTGGTT GGGCGATCGC GCTTTGGAGT CTTAGTCAGG CAGCAGTCAG CCTCGCCTTA ATTGGGGTTC TGATTGGGAA GGCGCGGCTA GAAGAACGAT GGTTGCGCGA TCGTTATTCC GACTACGTCG ACTACCAAAC TCGCGTTAAA GCTTTTATTC CGGGCCTGAT TTAG
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Protein sequence | MALFQRWGFD WKHWYRGDRG EYWLLAQLVL LVALVLVPRW AIPIAADWIV WRWAIAIPFL IMGAGLAIAG LRFLGDSLSP LPAPHAESTL VQTGIYAWIR HPLYSGLMIG SLGWAIALWS LSQAAVSLAL IGVLIGKARL EERWLRDRYS DYVDYQTRVK AFIPGLI
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