| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1216 |
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| Symbol | |
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| ID | 3773504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1238550 |
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| End bp | 1240109 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637799645 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_400233 |
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| Protein GI | 81300025 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction
[COG2874] Predicted ATPases involved in biogenesis of archaeal flagella |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG CTGAGATGAC TAGCCCTAAT AATAATTCTG AGCACCAAGC CATCGCTAAG
ATGCGCACGA TGATTGAAGG CTTTGATGAT ATTAGTCATG GCGGTCTTCC AATCGGGCGA
TCGACCCTCG TTAGTGGTAC TTCAGGAACC GGCAAGACCC TTTTTTCTAT TCAATTTCTC
TATAACGGTA TTATCGAGTT TGATGAGCCT GGGGTTTTCG TTACTTTCGA AGAAACCCCG
CAAGATATCA TTAAAAACGC CCGTAGTTTT GGCTGGGATT TAGCCAAGCT GGTCGATGAG
GGCAAACTAT TTATTCTTGA TGCTTCACCC GATCCAGAAG GTCAAGAGGT TGTTGGCGGC
TTCGATCTCT CTGCTCTGAT TGAGCGGATT AATTATGCAA TTCAAAAGTA TCGAGCGCGG
CGGGTTTCAA TTGACTCGGT CACGTCCGTT TTCCAGCAAT ATGATGCCTC TTCTGTGGTT
CGCCGCGAAC TCTTTCGGTT GGTAGCTCGC CTAAAACAAA TTGGGGCAAC TACGGTCATG
ACCACCGAGC GTATCGAGGA ATATGGCCCG ATCGCTCGTT ACGGTGTTGA GGAATTTGTC
TCCGATAACG TCGTGATTCT CCGCAACGTT TTGGAAGGGG AGCGCCGTCG CCGCACCCTC
GAAATCCTCA AGCTACGTGG CACCAGCCAC ATGAAAGGGG AATATCCGTT CACGATTACG
GATCATGGCA TCAATATCTT CCCGCTCGGG GCAATGCGCC TTACGCAGCG ATCGTCGAAC
GTGCGTGTTT CATCTGGTGT CGTCCGACTC GATGAAATGT GTGGTGGGGG CTTCTTTAAG
GACTCAATCA TTCTGGCAAC TGGCGCTACA GGCACTGGTA AAACTCTGTT AGTTAGCCGT
TTCGTTGAGA ATGCTTGTGC TAACAAAGAG CGGGCGATTC TGTTCGCTTA TGAAGAGTCA
CGAGCTCAGC TGCTCCGCAA TGCCTATTCA TGGGGAATGG ACTTTGAGGA GATGGAGCGC
CAAAACCTCC TCAAAATTGT TTGCGCCTAT CCTGAATCTG CAGGTCTTGA AGACCATTTG
CAGATTATTA AGTCGGAGAT CAATGACTTT AAGCCAGCTC GTATTGCAAT CGACTCCCTC
TCTGCTTTGG CGCGGGGCGT TAGCAACAAT GCCTTCCGCC AATTTGTAAT TGGTGTCACT
GGCTACGCGA AACAAGAAGA AATCACGGGA CTATTCACAA ATACCAGTGA TCAATTTATG
GGAGCGCATT CGATTACTGA CTCCCATATC TCAACAATTA CGGATACGAT TATCTTGCTC
CAATACGTCG AGATTCGTGG CGAAATGTCC CGCGCCATTA ACGTCTTCAA GATGCGCGGA
TCTTGGCATG ACAAAGCAAT CCGCGAATTC ATGATCAGCG ACAAAGGGCC GGACATCAAG
GATTCTTTCC GGAACTTTGA GCGGATTATT TCAGGTTCGC CAACACGGAT TACCGTCGAT
GAGAAAAGCG AACTCTCGCG AATTGTGCGC GGCGTTCAAG AAAAAGGGCC GGAGAGCTAG
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| Protein sequence | MTSAEMTSPN NNSEHQAIAK MRTMIEGFDD ISHGGLPIGR STLVSGTSGT GKTLFSIQFL
YNGIIEFDEP GVFVTFEETP QDIIKNARSF GWDLAKLVDE GKLFILDASP DPEGQEVVGG
FDLSALIERI NYAIQKYRAR RVSIDSVTSV FQQYDASSVV RRELFRLVAR LKQIGATTVM
TTERIEEYGP IARYGVEEFV SDNVVILRNV LEGERRRRTL EILKLRGTSH MKGEYPFTIT
DHGINIFPLG AMRLTQRSSN VRVSSGVVRL DEMCGGGFFK DSIILATGAT GTGKTLLVSR
FVENACANKE RAILFAYEES RAQLLRNAYS WGMDFEEMER QNLLKIVCAY PESAGLEDHL
QIIKSEINDF KPARIAIDSL SALARGVSNN AFRQFVIGVT GYAKQEEITG LFTNTSDQFM
GAHSITDSHI STITDTIILL QYVEIRGEMS RAINVFKMRG SWHDKAIREF MISDKGPDIK
DSFRNFERII SGSPTRITVD EKSELSRIVR GVQEKGPES
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