Gene Synpcc7942_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1203 
Symbol 
ID3774439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1233050 
End bp1233463 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content54% 
IMG OID637799630 
Producthypothetical protein 
Protein accessionYP_400220 
Protein GI81300012 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.524053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTG TGTTGGATGT CTCACTGGCT TGTGCTTGGT GTTTTGCGGA TGAGGCAACA 
CCGGAATCTT GGGCTTTATT GGAGCAGTTG CAACAATCTC CAGCAGTTGT CCCTGCACTT
TGGCTCTGGG AAGTTGGGCA TGTCTTGGTG CAAGCAGAGC GCCGGCAAAG GATTAGCGCC
GCTGCGAGTC GTGAGTTTTT ATCGCTGCTA GAGATGTTGC CGATTGAGGT AGAACCCGCT
GCTGTCGGTA CCGTTTGGCA TGACACATTG GCGATCGCTT GCAGTCAACA GCTGACTGCT
TATGACGCAG CTTATTTGGA GCTGGCGATG CGGCGGGGAT TCGCTCTGGC AACTTGCGAT
CGCGCCTTGA TCAGTGCTGC GGAAGCCGTG GGAGTTACGT TACTGCCGAC CTAA
 
Protein sequence
MSFVLDVSLA CAWCFADEAT PESWALLEQL QQSPAVVPAL WLWEVGHVLV QAERRQRISA 
AASREFLSLL EMLPIEVEPA AVGTVWHDTL AIACSQQLTA YDAAYLELAM RRGFALATCD
RALISAAEAV GVTLLPT