Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1200 |
Symbol | |
ID | 3774436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1228048 |
End bp | 1229061 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799627 |
Product | hypothetical protein |
Protein accession | YP_400217 |
Protein GI | 81300009 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.160085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTGCTG CTAAACCTCG CGCCTCAACC ATCCCGGGCC AGCGCTGGAT TTTACCGCTG CTGTTGGTCA CCGCATTGCT CAATCTGGGG CTGATGATTT GGGGTGGCTG GCAGACGATT TGGCAACAGT TTCGCCAGAT TCCAATCGCC TTCTATCCCC TCAGCCTCCT GCTGATGGGT TTGAGCTATA GTCTGGGCTT TTGGCGCTGG CACACCTATT TGCAAGTGCT TGATCATTGG CTGCCAGTCC GTTCCAGCCT GCGCATTTTC CTCGGCAGCT TAGCCCTGAT AGCCTCACCG GGACGAGCCG GAGAATCAAT CAAAGCCCTG TGGTTACGGC AACAATTTGG CGTTTCGGCG GCGCGATCGC TGGCGGGGCT GTTCTGTGAA CGGCTCTGTG ATCTACTGGC CGCTTTGCTG TTAGTCGCCC TGGGATTCTC TGCTCGCTTG GGTACGGGCT TCTGGTGGGC CTGTCTGGGC CTGGCGATCG CTCTATTTCT GATCCTGAGC CAGCCTCAAC GCCTACAGGC TTGGGCCAAA CGCTTTGGCG GGCGATCGCG ACGGCGCAAA GGCTTAGAGC GCTTGGCGCA TCTCCTCTTC AGCGCCCGTC GCCTGCTGCA ACCGCGATTT TTGGCGGGTG GCTTGCTGAT TTCGCTGCTC ACTTGGGCGA TCGAAGGGGT CGTGCTCTAC GGCTGTTTTC AGGTGTTGCA AGCCGAGATC AATCTGCCGA CAGCGATCGT AATTCGAGCC GCTGTGGGTT TGGGTGGAGT ACTAACGCTG CTCCCCGGCG GCTTGGGGGG GGCAGAAGCT GCCTCGATTT CCTTGGCGTT GCTCTACGGG GCCGATCGCG ATCAAGCGAT TGCAGCGACG GTGCTGCTTC GTCTGCTCAC TCTTTGGTTC CCGATCGCGA TCGGTTGGGT AGCCTTGCAT CGCCAAACAC GTACCCTCAA ATCTCTCGCG TTGTCTTCTC TCCCTGACAC TGATGCTGAC CAGTCGCCAA AATCCTCTCA CTAA
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Protein sequence | MTAAKPRAST IPGQRWILPL LLVTALLNLG LMIWGGWQTI WQQFRQIPIA FYPLSLLLMG LSYSLGFWRW HTYLQVLDHW LPVRSSLRIF LGSLALIASP GRAGESIKAL WLRQQFGVSA ARSLAGLFCE RLCDLLAALL LVALGFSARL GTGFWWACLG LAIALFLILS QPQRLQAWAK RFGGRSRRRK GLERLAHLLF SARRLLQPRF LAGGLLISLL TWAIEGVVLY GCFQVLQAEI NLPTAIVIRA AVGLGGVLTL LPGGLGGAEA ASISLALLYG ADRDQAIAAT VLLRLLTLWF PIAIGWVALH RQTRTLKSLA LSSLPDTDAD QSPKSSH
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