Gene Synpcc7942_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1193 
Symbol 
ID3774429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1221676 
End bp1222398 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID637799620 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_400210 
Protein GI81300002 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.573508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGT GTCAGCAGTC TCGCGTTTCT GGCTGGCTTG CCCCCTTGGC CTATCAGATG 
GTCGGGCGGA TTGTTTTACC TTGCCGCTTT GCCGAGATCG ACATTGCCGG CATCGACCAT
ATTCCCCGCA GTGGGCCAGT GATTCTGGCG CCCACTCATC GATCGCGCTG GGATGCGCTG
ATGGTTCCCC ATGCGGTAGG GCGGCCCACC TCCGGCCGTG ACGTGCGCTT CATGGTTTCC
GCCAATGAAA TGCGAGGCAT CCAGGGTTGG TTTATCTGGC GGCTGGGGGG CTTCCCTGTC
GATACCGATC GCCCGGGCAT CGCCAGTGTG CGCTACGGCG TAGAACTGCT CCTGCAGCAG
CAGATGGTGG TTGTGTTTCC AGAGGGTGGC ATCTTTCAAG ATCGGCAGGT GCATCCCCTC
AAGCTTGGGC CAGCCCGGAT GGCATTGCAG GCGCAGCACC TAGGTCATGA ACCAGTCCAA
ATTGTGCCGA TTGGCTTGGT CTACAGCGAT CTGCAGCCTC GGCGCGGTAG CCGCTGCAGT
ATTCGCATCG GTCAACCCCT GTCCACCCAA AGCTATCGAC AGCACTCGCC CAAACAGGGG
GCGATCGCTC TGACCCGCGA TTTAGCCGAT CAATTGGGCC GACTCCATCA GCAGGCGCTG
CATCATGTTT TGCCTTGTCA GGAACCCTTG ATGCCCTTGC CACCGTCCCA AGAGTTGCTC
TAG
 
Protein sequence
MLQCQQSRVS GWLAPLAYQM VGRIVLPCRF AEIDIAGIDH IPRSGPVILA PTHRSRWDAL 
MVPHAVGRPT SGRDVRFMVS ANEMRGIQGW FIWRLGGFPV DTDRPGIASV RYGVELLLQQ
QMVVVFPEGG IFQDRQVHPL KLGPARMALQ AQHLGHEPVQ IVPIGLVYSD LQPRRGSRCS
IRIGQPLSTQ SYRQHSPKQG AIALTRDLAD QLGRLHQQAL HHVLPCQEPL MPLPPSQELL