Gene Synpcc7942_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1188 
Symbol 
ID3775494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1217650 
End bp1218042 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID637799615 
ProductAP-4-A phosphorylase II-like protein 
Protein accessionYP_400205 
Protein GI81299997 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.13202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTCT CCCACCCCGA TCGCCAGGCC CTAAAAGCAC TAGATCATCA ACTTTCCAAT 
CGCTTCATCA AGCTGGATCC AGAAGGTTAT TTCGTGATTT ATCTCGATCG CGAAGCTGGA
TTGATCTGCG CTGATCACTA CAGCAATGCG ATCAACGACA AAGGCCTCGC CACCGATCCA
GAAACCGGGG AAGTGCTGGC TTGTAAAGGC AATCTCAAGC GGGTACCCAC GGCAACATTT
CGCGGCCGCA CCGCTAAGGA ACTCGGCAAG TTGATTACCG AAGACACTCA GCCCTGTCCG
CTCAGTTATC TCGACCACGC ACTCTATTTA GGGCGTGAGT TCCAGCGAGC AGAAGCCTGT
CTGCTCAGCG GTCAAGACTA CGTTCAAGAC TGA
 
Protein sequence
MLLSHPDRQA LKALDHQLSN RFIKLDPEGY FVIYLDREAG LICADHYSNA INDKGLATDP 
ETGEVLACKG NLKRVPTATF RGRTAKELGK LITEDTQPCP LSYLDHALYL GREFQRAEAC
LLSGQDYVQD