Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1180 |
Symbol | |
ID | 3775486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1211703 |
End bp | 1212104 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637799607 |
Product | NADH dehydrogenase subunit A |
Protein accession | YP_400197 |
Protein GI | 81299989 |
COG category | [C] Energy production and conversion |
COG ID | [COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.675934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAT GGAATAGCGA CTGCAGCCTG GAGTTTGGCG TGTTTGTCCT CAATGGCTAC GAATATCTAC TTGGCTTTCT GCTCATCAGC TCACTGGTCC CCATCCTTTC GCTGACCGCC TCGCGCTTGC TGCGACCTGG TCGTCGAGGA CCGGAGCGGC GGACGACCTA CGAATCGGGG ATGGAACCGA TCGGGGGAGC TTGGATCCAA TTCAACGTGC GCTACTACAT GTTTGCGCTC GTATTCGTGA TCTTTGATGT AGAAACCGTC TTCCTCTATC CCTGGGCCGT CGCCTTTAAT CGGCTGGGGT TACTGGCTTT TGTCGAGGCG TTGATCTTCA TCACGATCCT CGTTGTTGGT CTAGCCTATG CATGGCGCAA AGGAGCCTTG GAATGGTCCT GA
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Protein sequence | MAKWNSDCSL EFGVFVLNGY EYLLGFLLIS SLVPILSLTA SRLLRPGRRG PERRTTYESG MEPIGGAWIQ FNVRYYMFAL VFVIFDVETV FLYPWAVAFN RLGLLAFVEA LIFITILVVG LAYAWRKGAL EWS
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