Gene Synpcc7942_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1167 
Symbol 
ID3775473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1200773 
End bp1201330 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content54% 
IMG OID637799594 
Producthypothetical protein 
Protein accessionYP_400184 
Protein GI81299976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.683813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTAG ACGCCTTTCA TTACTTTTTT GACTGCTGTG TCGGCAGTTG GAGCACTGAG 
CGCACCTATC ACTACCTCAG TCGCCAAGAA GTCGAGCGAT CGCATACAGA ATTCGCGGTG
CGATCGCTCT CCGCCGAGAC AAAAGCGCAA GTTCTGACGG CCAACGCTCT AACCGCAGAT
CAGGCTTTAG AACAACTGCT CGGATTCTGC CTCGGCTTTC ACACGGTTTC GGAACACGGC
GAAGAAGTCA GCCAAGAACT GAACATGCTG TTTGTGCCTC GAAGCACAGA AGACGGCTGG
TTGGTGGGCG ACTACCTACG CGATCGTGCT TACGAAGAAG CGCGTCCCAT TATCTCCGCT
TTTCGCTTCA ACCCTGACAG CCGCGAACTC CTGATGACTA CGCGCTACAC CCGCACAATT
TCTGTCGATT CGATCACGCT GGTCAATCCT CGCCTGCGAG TGCGTCGCAT TTTGAATTAC
GTCCGACCGG CCAGCGACGA TCAACCCCTG GATACGCTTT CCCTAGTCGG CTTTGGGGTC
GAGCAAAAAA CAGATTGA
 
Protein sequence
MSLDAFHYFF DCCVGSWSTE RTYHYLSRQE VERSHTEFAV RSLSAETKAQ VLTANALTAD 
QALEQLLGFC LGFHTVSEHG EEVSQELNML FVPRSTEDGW LVGDYLRDRA YEEARPIISA
FRFNPDSREL LMTTRYTRTI SVDSITLVNP RLRVRRILNY VRPASDDQPL DTLSLVGFGV
EQKTD